Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AC117522.3-201ENST00000507974 584 ntBASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AP003392.2-201ENST00000527269 208 ntBASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 VDAC2P2-201ENST00000544463 901 ntBASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 SRMP2-201ENST00000553832 916 ntBASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AC013452.1-201ENST00000560630 598 ntBASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 MIR3671-201ENST00000580455 88 ntBASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 ABBA01006766.1-201ENST00000584728 294 ntBASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AC091805.2-201ENST00000603848 235 ntBASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AC080112.3-201ENST00000612552 880 ntBASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 7SK.12-201ENST00000612820 244 ntBASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AC074029.3-201ENST00000618623 312 ntBASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AC019278.1-201ENST00000623516 479 ntBASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AC090617.9-201ENST00000623751 147 ntBASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 FER-210ENST00000628534 558 ntTSL 5 BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AL357140.4-201ENST00000636827 412 ntBASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AP002991.2-201ENST00000623807 2801 ntBASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 AC092821.3-202ENST00000641304 2767 ntBASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 MSANTD3-TMEFF1-201ENST00000502978 2069 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 OR7E25P-202ENST00000641088 5937 ntBASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 NF1P8-201ENST00000415351 1461 ntBASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.12□□□□□ -1.11
FOXR1Q6PIV2 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 OR2AH1P-202ENST00000641232 2744 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 SAMMSON-222ENST00000641901 2727 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 AL022163.1-201ENST00000430261 1569 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 AC091305.2-201ENST00000624049 1576 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 OR2G2-201ENST00000320065 954 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 RN7SKP48-201ENST00000365031 328 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 DYNLT3-202ENST00000378581 920 ntTSL 2 BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 SMARCA2-205ENST00000382183 1178 ntTSL 5 BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 Y_RNA.578-201ENST00000390903 88 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 NUS1P4-201ENST00000401550 585 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 VTA1P1-201ENST00000414044 866 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 AL158825.1-201ENST00000414735 521 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 AC023128.2-201ENST00000420880 1223 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 IPPKP1-201ENST00000422501 768 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 RPL23AP34-201ENST00000423483 410 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 Z68871.1-201ENST00000426528 1133 ntTSL 5 BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 AC010975.2-201ENST00000427781 588 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 HIGD1AP12-201ENST00000427832 281 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 RPS10P2-201ENST00000430953 494 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 HMGB1P31-201ENST00000437242 427 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 AC105942.1-202ENST00000438509 952 ntTSL 3 BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 FUNDC2P4-201ENST00000441207 421 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 MTND5P14-201ENST00000441481 1267 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 AC002486.2-201ENST00000447806 590 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 MTND1P18-201ENST00000448191 573 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 AC069213.3-201ENST00000454858 474 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 AL109741.2-201ENST00000455561 343 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 PSMA6P2-201ENST00000457574 686 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 ANK3-207ENST00000460468 677 ntTSL 3 BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 SETP11-201ENST00000473027 690 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 RN7SL705P-201ENST00000481678 294 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 RN7SL403P-201ENST00000481783 305 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 AC026414.1-201ENST00000504046 698 ntBASIC8.11□□□□□ -1.11
FOXR1Q6PIV2 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms