Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 DPPA3P2-201ENST00000553589 478 ntBASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 AC068768.2-201ENST00000602352 343 ntBASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 AL136097.3-201ENST00000611097 505 ntBASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 RFPL4AP6-201ENST00000616792 846 ntBASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 AL512652.1-201ENST00000619006 500 ntBASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 AC087269.2-201ENST00000641764 975 ntBASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 CDY10P-201ENST00000452415 1567 ntBASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 PSG10P-201ENST00000501199 1500 ntBASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 CYCSP52-201ENST00000422857 310 ntBASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 AC003989.1-201ENST00000434569 565 ntBASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 AL353662.1-201ENST00000439099 327 ntBASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 AC097463.1-201ENST00000447288 481 ntBASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 RN7SL714P-201ENST00000487050 298 ntBASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 IGHV4-55-201ENST00000520889 368 ntBASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 IGKV3D-34-201ENST00000522638 302 ntBASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 AC068305.2-201ENST00000550567 1205 ntBASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 AC008507.3-201ENST00000585753 472 ntBASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 OR7A11P-201ENST00000597719 953 ntBASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 AC025171.4-201ENST00000607250 1047 ntBASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 AL008723.3-201ENST00000608926 449 ntBASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 AL512356.3-201ENST00000623005 461 ntBASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 AC008691.1-209ENST00000642094 814 ntBASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SHROOM1Q2M3G4 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 AC012213.2-201ENST00000562917 4597 ntBASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 MIR541-201ENST00000401360 84 ntBASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 RPL7AP14-201ENST00000424041 802 ntBASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 AC073109.1-201ENST00000445066 978 ntBASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms