Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CDH6P55285 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDH6P55285 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDH6P55285 Z93929.1-201ENST00000418200 1475 ntBASIC6.61□□□□□ -1.35
CDH6P55285 AC217777.1-201ENST00000570034 1471 ntBASIC6.61□□□□□ -1.35
CDH6P55285 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDH6P55285 AC110373.1-201ENST00000505994 3505 ntBASIC6.61□□□□□ -1.35
CDH6P55285 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.61□□□□□ -1.35
CDH6P55285 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.61□□□□□ -1.35
CDH6P55285 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CDH6P55285 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.61□□□□□ -1.35
CDH6P55285 RNA5SP85-201ENST00000365378 119 ntBASIC6.61□□□□□ -1.35
CDH6P55285 MIR551B-201ENST00000384984 96 ntBASIC6.61□□□□□ -1.35
CDH6P55285 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CDH6P55285 RN7SKP161-201ENST00000411110 305 ntBASIC6.61□□□□□ -1.35
CDH6P55285 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.61□□□□□ -1.35
CDH6P55285 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.61□□□□□ -1.35
CDH6P55285 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.61□□□□□ -1.35
CDH6P55285 GAPDHP19-201ENST00000431768 1005 ntBASIC6.61□□□□□ -1.35
CDH6P55285 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.61□□□□□ -1.35
CDH6P55285 AL031681.1-201ENST00000443304 400 ntBASIC6.61□□□□□ -1.35
CDH6P55285 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.61□□□□□ -1.35
CDH6P55285 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CDH6P55285 OR9A1P-202ENST00000484361 945 ntBASIC6.61□□□□□ -1.35
CDH6P55285 AC015524.1-201ENST00000491585 472 ntBASIC6.61□□□□□ -1.35
CDH6P55285 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.61□□□□□ -1.35
CDH6P55285 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.61□□□□□ -1.35
CDH6P55285 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.61□□□□□ -1.35
CDH6P55285 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.61□□□□□ -1.35
CDH6P55285 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.61□□□□□ -1.35
CDH6P55285 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.61□□□□□ -1.35
CDH6P55285 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.61□□□□□ -1.35
CDH6P55285 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.61□□□□□ -1.35
CDH6P55285 MIR4732-201ENST00000581873 76 ntBASIC6.61□□□□□ -1.35
CDH6P55285 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.61□□□□□ -1.35
CDH6P55285 RN7SL475P-201ENST00000583379 298 ntBASIC6.61□□□□□ -1.35
CDH6P55285 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CDH6P55285 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.61□□□□□ -1.35
CDH6P55285 AL138693.1-201ENST00000622219 129 ntBASIC6.61□□□□□ -1.35
CDH6P55285 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.61□□□□□ -1.35
CDH6P55285 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.61□□□□□ -1.35
CDH6P55285 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDH6P55285 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.61□□□□□ -1.35
CDH6P55285 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CDH6P55285 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.61□□□□□ -1.35
CDH6P55285 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDH6P55285 AC022507.1-201ENST00000548349 1505 ntBASIC6.6□□□□□ -1.35
CDH6P55285 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CDH6P55285 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CDH6P55285 GUCY1B2-204ENST00000531898 1979 ntBASIC6.6□□□□□ -1.35
CDH6P55285 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
CDH6P55285 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.6□□□□□ -1.35
CDH6P55285 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CDH6P55285 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
CDH6P55285 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CDH6P55285 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CDH6P55285 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CDH6P55285 AC009831.5-201ENST00000624000 3189 ntBASIC6.6□□□□□ -1.35
CDH6P55285 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.6□□□□□ -1.35
CDH6P55285 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CDH6P55285 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CDH6P55285 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CDH6P55285 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CDH6P55285 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CDH6P55285 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.6□□□□□ -1.35
CDH6P55285 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CDH6P55285 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CDH6P55285 HSPE1P27-201ENST00000430808 296 ntBASIC6.6□□□□□ -1.35
CDH6P55285 PA2G4P1-201ENST00000442248 1197 ntBASIC6.6□□□□□ -1.35
CDH6P55285 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.6□□□□□ -1.35
CDH6P55285 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.6□□□□□ -1.35
CDH6P55285 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CDH6P55285 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.6□□□□□ -1.35
CDH6P55285 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.6□□□□□ -1.35
CDH6P55285 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.6□□□□□ -1.35
CDH6P55285 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.6□□□□□ -1.35
CDH6P55285 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.6□□□□□ -1.35
CDH6P55285 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CDH6P55285 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.6□□□□□ -1.35
CDH6P55285 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CDH6P55285 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.6□□□□□ -1.35
CDH6P55285 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.6□□□□□ -1.35
CDH6P55285 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.6□□□□□ -1.35
CDH6P55285 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.6□□□□□ -1.35
CDH6P55285 AC068726.1-201ENST00000610993 341 ntBASIC6.6□□□□□ -1.35
CDH6P55285 MIR6885-201ENST00000612241 66 ntBASIC6.6□□□□□ -1.35
CDH6P55285 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.6□□□□□ -1.35
CDH6P55285 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.6□□□□□ -1.35
CDH6P55285 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CDH6P55285 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CDH6P55285 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CDH6P55285 WBP11P1-201ENST00000562560 1931 ntBASIC6.6□□□□□ -1.35
CDH6P55285 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CDH6P55285 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDH6P55285 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CDH6P55285 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.59□□□□□ -1.35
CDH6P55285 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.59□□□□□ -1.35
CDH6P55285 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDH6P55285 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDH6P55285 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms