Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.96□□□□□ -1.3
NEK3P51956 RN7SL612P-201ENST00000497704 295 ntBASIC6.96□□□□□ -1.3
NEK3P51956 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
NEK3P51956 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.96□□□□□ -1.3
NEK3P51956 RNA5SP318-201ENST00000516352 92 ntBASIC6.96□□□□□ -1.3
NEK3P51956 SUMO2P19-201ENST00000518920 295 ntBASIC6.96□□□□□ -1.3
NEK3P51956 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.96□□□□□ -1.3
NEK3P51956 NXPE2P1-201ENST00000543705 726 ntBASIC6.96□□□□□ -1.3
NEK3P51956 AC092375.1-201ENST00000550410 637 ntBASIC6.96□□□□□ -1.3
NEK3P51956 CHEK2P2-201ENST00000554701 672 ntBASIC6.96□□□□□ -1.3
NEK3P51956 AC005972.3-201ENST00000606304 481 ntBASIC6.96□□□□□ -1.3
NEK3P51956 AL137000.1-201ENST00000610528 1244 ntBASIC6.96□□□□□ -1.3
NEK3P51956 AC026951.2-201ENST00000613847 241 ntBASIC6.96□□□□□ -1.3
NEK3P51956 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.96□□□□□ -1.3
NEK3P51956 AC244100.4-201ENST00000617747 388 ntBASIC6.96□□□□□ -1.3
NEK3P51956 OR1N1-202ENST00000619659 939 ntBASIC6.96□□□□□ -1.3
NEK3P51956 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
NEK3P51956 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.96□□□□□ -1.3
NEK3P51956 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.96□□□□□ -1.3
NEK3P51956 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
NEK3P51956 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
NEK3P51956 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.96□□□□□ -1.3
NEK3P51956 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
NEK3P51956 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.96□□□□□ -1.3
NEK3P51956 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
NEK3P51956 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.96□□□□□ -1.3
NEK3P51956 AC003985.2-201ENST00000562268 1669 ntBASIC6.96□□□□□ -1.3
NEK3P51956 PSMC1P4-201ENST00000515236 1327 ntBASIC6.96□□□□□ -1.3
NEK3P51956 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.96□□□□□ -1.3
NEK3P51956 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
NEK3P51956 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.96□□□□□ -1.3
NEK3P51956 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NEK3P51956 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.95□□□□□ -1.3
NEK3P51956 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.95□□□□□ -1.3
NEK3P51956 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.95□□□□□ -1.3
NEK3P51956 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.95□□□□□ -1.3
NEK3P51956 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NEK3P51956 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.95□□□□□ -1.3
NEK3P51956 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NEK3P51956 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.95□□□□□ -1.3
NEK3P51956 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.95□□□□□ -1.3
NEK3P51956 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.95□□□□□ -1.3
NEK3P51956 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
NEK3P51956 RN7SKP184-201ENST00000362348 333 ntBASIC6.95□□□□□ -1.3
NEK3P51956 RNU6-1251P-201ENST00000364502 107 ntBASIC6.95□□□□□ -1.3
NEK3P51956 RN7SKP191-201ENST00000364713 306 ntBASIC6.95□□□□□ -1.3
NEK3P51956 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NEK3P51956 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
NEK3P51956 CCNB2P1-201ENST00000399411 1150 ntBASIC6.95□□□□□ -1.3
NEK3P51956 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NEK3P51956 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.95□□□□□ -1.3
NEK3P51956 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.95□□□□□ -1.3
NEK3P51956 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NEK3P51956 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.95□□□□□ -1.3
NEK3P51956 AC000089.1-201ENST00000424559 801 ntBASIC6.95□□□□□ -1.3
NEK3P51956 AL589794.1-201ENST00000424971 390 ntBASIC6.95□□□□□ -1.3
NEK3P51956 AP003385.1-201ENST00000426387 893 ntBASIC6.95□□□□□ -1.3
NEK3P51956 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.95□□□□□ -1.3
NEK3P51956 DSTNP5-201ENST00000427921 523 ntBASIC6.95□□□□□ -1.3
NEK3P51956 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.95□□□□□ -1.3
NEK3P51956 AC234771.4-201ENST00000441416 730 ntBASIC6.95□□□□□ -1.3
NEK3P51956 Z99127.2-201ENST00000441426 334 ntBASIC6.95□□□□□ -1.3
NEK3P51956 WDR82P2-201ENST00000444540 928 ntBASIC6.95□□□□□ -1.3
NEK3P51956 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.95□□□□□ -1.3
NEK3P51956 NPM1P9-201ENST00000453156 844 ntBASIC6.95□□□□□ -1.3
NEK3P51956 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.95□□□□□ -1.3
NEK3P51956 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NEK3P51956 UOX-201ENST00000471089 899 ntBASIC6.95□□□□□ -1.3
NEK3P51956 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.95□□□□□ -1.3
NEK3P51956 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.95□□□□□ -1.3
NEK3P51956 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.95□□□□□ -1.3
NEK3P51956 AC074386.1-206ENST00000487102 761 ntBASIC6.95□□□□□ -1.3
NEK3P51956 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.95□□□□□ -1.3
NEK3P51956 MINOS1P4-201ENST00000515470 318 ntBASIC6.95□□□□□ -1.3
NEK3P51956 RNA5SP278-201ENST00000517055 102 ntBASIC6.95□□□□□ -1.3
NEK3P51956 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.95□□□□□ -1.3
NEK3P51956 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.95□□□□□ -1.3
NEK3P51956 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.95□□□□□ -1.3
NEK3P51956 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.95□□□□□ -1.3
NEK3P51956 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.95□□□□□ -1.3
NEK3P51956 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.95□□□□□ -1.3
NEK3P51956 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.95□□□□□ -1.3
NEK3P51956 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.95□□□□□ -1.3
NEK3P51956 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
NEK3P51956 ARGFXP2-201ENST00000579304 949 ntBASIC6.95□□□□□ -1.3
NEK3P51956 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NEK3P51956 AC005479.3-201ENST00000602790 431 ntBASIC6.95□□□□□ -1.3
NEK3P51956 AL683813.2-201ENST00000605245 502 ntBASIC6.95□□□□□ -1.3
NEK3P51956 AC073575.2-201ENST00000614212 627 ntBASIC6.95□□□□□ -1.3
NEK3P51956 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
NEK3P51956 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.95□□□□□ -1.3
NEK3P51956 AC005858.3-201ENST00000624756 589 ntBASIC6.95□□□□□ -1.3
NEK3P51956 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
NEK3P51956 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NEK3P51956 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.95□□□□□ -1.3
NEK3P51956 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NEK3P51956 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NEK3P51956 AL139384.2-201ENST00000613809 3590 ntBASIC6.95□□□□□ -1.3
NEK3P51956 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NEK3P51956 AC022034.1-201ENST00000512867 2156 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms