Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
RNF144AP50876 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RNF144AP50876 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.7□□□□□ -1.18
RNF144AP50876 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
RNF144AP50876 AC138393.1-206ENST00000540997 1886 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF144AP50876 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC7.7□□□□□ -1.18
RNF144AP50876 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
RNF144AP50876 ZNF840P-201ENST00000504759 1996 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RNF144AP50876 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RNF144AP50876 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RNF144AP50876 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC7.7□□□□□ -1.18
RNF144AP50876 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC7.7□□□□□ -1.18
RNF144AP50876 LINC00955-202ENST00000514422 1502 ntTSL 4 BASIC7.7□□□□□ -1.18
RNF144AP50876 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
RNF144AP50876 CRYGA-201ENST00000304502 609 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF144AP50876 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
RNF144AP50876 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF144AP50876 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC7.7□□□□□ -1.18
RNF144AP50876 RN7SKP72-201ENST00000362327 292 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 RNU6-707P-201ENST00000364647 95 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.7□□□□□ -1.18
RNF144AP50876 LEMD1-201ENST00000367149 604 ntTSL 3 BASIC7.7□□□□□ -1.18
RNF144AP50876 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
RNF144AP50876 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
RNF144AP50876 RNU6-31P-201ENST00000384388 108 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 Y_RNA.529-201ENST00000384586 119 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 MIR637-201ENST00000385000 99 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
RNF144AP50876 APLF-202ENST00000394342 1182 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RNF144AP50876 AL121977.1-201ENST00000401636 979 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 AL133406.1-201ENST00000404904 747 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 HMGB3P23-201ENST00000414981 585 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 GACAT1-201ENST00000419650 577 ntTSL 4 BASIC7.7□□□□□ -1.18
RNF144AP50876 LINC00993-201ENST00000420453 540 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 AL117378.1-202ENST00000421310 601 ntTSL 5 BASIC7.7□□□□□ -1.18
RNF144AP50876 AC009237.2-201ENST00000421358 284 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 AC007742.1-201ENST00000425789 329 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC7.7□□□□□ -1.18
RNF144AP50876 VNN3-208ENST00000427187 1214 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RNF144AP50876 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.7□□□□□ -1.18
RNF144AP50876 HSPD1P12-201ENST00000429127 1069 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC7.7□□□□□ -1.18
RNF144AP50876 OR51R1P-201ENST00000435309 952 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 ELOCP26-201ENST00000436067 329 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 RAB9AP5-201ENST00000437794 597 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.7□□□□□ -1.18
RNF144AP50876 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC7.7□□□□□ -1.18
RNF144AP50876 PCNPP2-201ENST00000441651 455 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 IGKV1D-35-201ENST00000442736 271 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 RAB9AP2-201ENST00000443911 597 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 RPL35P4-201ENST00000446039 322 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC7.7□□□□□ -1.18
RNF144AP50876 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC7.7□□□□□ -1.18
RNF144AP50876 AL031727.1-201ENST00000457263 455 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.7□□□□□ -1.18
RNF144AP50876 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.7□□□□□ -1.18
RNF144AP50876 RN7SL571P-201ENST00000468302 295 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RNF144AP50876 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC7.7□□□□□ -1.18
RNF144AP50876 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC7.7□□□□□ -1.18
RNF144AP50876 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RNF144AP50876 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RNF144AP50876 RNU6-1045P-201ENST00000516321 107 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 IGHVII-15-1-201ENST00000517931 220 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC7.7□□□□□ -1.18
RNF144AP50876 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.7□□□□□ -1.18
RNF144AP50876 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.7□□□□□ -1.18
RNF144AP50876 RPL10P9-201ENST00000522551 645 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 AC104117.2-201ENST00000523735 515 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 AC109635.2-202ENST00000529219 500 ntTSL 3 BASIC7.7□□□□□ -1.18
RNF144AP50876 AC069235.1-202ENST00000545535 540 ntTSL 3 BASIC7.7□□□□□ -1.18
RNF144AP50876 OR7K1P-201ENST00000546439 926 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 AL133304.3-201ENST00000550089 477 ntTSL 3 BASIC7.7□□□□□ -1.18
RNF144AP50876 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC7.7□□□□□ -1.18
RNF144AP50876 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC7.7□□□□□ -1.18
RNF144AP50876 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC7.7□□□□□ -1.18
RNF144AP50876 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC7.7□□□□□ -1.18
RNF144AP50876 AC009121.2-201ENST00000572913 714 ntTSL 3 BASIC7.7□□□□□ -1.18
RNF144AP50876 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC7.7□□□□□ -1.18
RNF144AP50876 AC060780.3-201ENST00000589464 80 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 ZNF677-208ENST00000599012 796 ntTSL 3 BASIC7.7□□□□□ -1.18
RNF144AP50876 AL009028.1-201ENST00000604895 802 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 AP000238.1-201ENST00000608759 426 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 AL020991.1-201ENST00000612314 373 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 GNAS-AS1_2.1-201ENST00000613404 114 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 CARMN-212ENST00000614896 536 ntTSL 5 BASIC7.7□□□□□ -1.18
RNF144AP50876 ST7-OT4_3.1-201ENST00000615542 293 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 KRTAP7-1-201ENST00000621162 721 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
RNF144AP50876 AC025287.2-201ENST00000621911 668 ntBASIC7.7□□□□□ -1.18
RNF144AP50876 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC7.7□□□□□ -1.18
RNF144AP50876 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.7□□□□□ -1.18
RNF144AP50876 SH3D19-204ENST00000427414 2656 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF144AP50876 CASR-201ENST00000490131 4015 ntTSL 5 BASIC7.7□□□□□ -1.18
RNF144AP50876 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF144AP50876 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
RNF144AP50876 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
RNF144AP50876 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC7.7□□□□□ -1.18
RNF144AP50876 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms