Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC005632.2-201ENST00000564271 828 ntBASIC7.24□□□□□ -1.25
CIITAP33076 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.24□□□□□ -1.25
CIITAP33076 OR1E3-201ENST00000575608 948 ntBASIC7.24□□□□□ -1.25
CIITAP33076 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC7.24□□□□□ -1.25
CIITAP33076 MIR6811-201ENST00000620409 58 ntBASIC7.24□□□□□ -1.25
CIITAP33076 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.24□□□□□ -1.25
CIITAP33076 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
CIITAP33076 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC7.24□□□□□ -1.25
CIITAP33076 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CIITAP33076 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CIITAP33076 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.24□□□□□ -1.25
CIITAP33076 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CIITAP33076 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.23□□□□□ -1.25
CIITAP33076 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CIITAP33076 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CIITAP33076 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CIITAP33076 AC090181.3-201ENST00000624777 1514 ntBASIC7.23□□□□□ -1.25
CIITAP33076 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
CIITAP33076 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CIITAP33076 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.23□□□□□ -1.25
CIITAP33076 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CIITAP33076 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CIITAP33076 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.23□□□□□ -1.25
CIITAP33076 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.23□□□□□ -1.25
CIITAP33076 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.23□□□□□ -1.25
CIITAP33076 RPL11P4-201ENST00000332269 436 ntBASIC7.23□□□□□ -1.25
CIITAP33076 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CIITAP33076 U3.43-201ENST00000410734 213 ntBASIC7.23□□□□□ -1.25
CIITAP33076 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.23□□□□□ -1.25
CIITAP33076 OSTCP4-201ENST00000424397 449 ntBASIC7.23□□□□□ -1.25
CIITAP33076 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.23□□□□□ -1.25
CIITAP33076 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.23□□□□□ -1.25
CIITAP33076 AL359839.1-201ENST00000451975 1160 ntBASIC7.23□□□□□ -1.25
CIITAP33076 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.23□□□□□ -1.25
CIITAP33076 AC096754.1-201ENST00000508904 818 ntBASIC7.23□□□□□ -1.25
CIITAP33076 AC106800.3-201ENST00000511389 308 ntBASIC7.23□□□□□ -1.25
CIITAP33076 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.23□□□□□ -1.25
CIITAP33076 AC022616.2-201ENST00000523185 300 ntBASIC7.23□□□□□ -1.25
CIITAP33076 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.23□□□□□ -1.25
CIITAP33076 AC073916.1-201ENST00000545095 130 ntBASIC7.23□□□□□ -1.25
CIITAP33076 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.23□□□□□ -1.25
CIITAP33076 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.23□□□□□ -1.25
CIITAP33076 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CIITAP33076 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.23□□□□□ -1.25
CIITAP33076 RN7SL230P-201ENST00000580835 303 ntBASIC7.23□□□□□ -1.25
CIITAP33076 AC005332.4-201ENST00000592752 579 ntBASIC7.23□□□□□ -1.25
CIITAP33076 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.23□□□□□ -1.25
CIITAP33076 AC111152.1-202ENST00000635848 339 ntBASIC7.23□□□□□ -1.25
CIITAP33076 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.23□□□□□ -1.25
CIITAP33076 AL449283.1-201ENST00000602631 3403 ntBASIC7.23□□□□□ -1.25
CIITAP33076 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CIITAP33076 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CIITAP33076 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CIITAP33076 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CIITAP33076 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CIITAP33076 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CIITAP33076 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC7.23□□□□□ -1.25
CIITAP33076 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC7.23□□□□□ -1.25
CIITAP33076 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CIITAP33076 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CIITAP33076 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CIITAP33076 AKAP17BP-201ENST00000431706 2719 ntBASIC7.22□□□□□ -1.25
CIITAP33076 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CIITAP33076 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CIITAP33076 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CIITAP33076 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CIITAP33076 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
CIITAP33076 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CIITAP33076 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.22□□□□□ -1.25
CIITAP33076 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CIITAP33076 FAM32BP-201ENST00000344033 333 ntBASIC7.22□□□□□ -1.25
CIITAP33076 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
CIITAP33076 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CIITAP33076 AL139805.1-201ENST00000407837 289 ntBASIC7.22□□□□□ -1.25
CIITAP33076 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC7.22□□□□□ -1.25
CIITAP33076 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.22□□□□□ -1.25
CIITAP33076 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.22□□□□□ -1.25
CIITAP33076 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.22□□□□□ -1.25
CIITAP33076 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CIITAP33076 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.22□□□□□ -1.25
CIITAP33076 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
CIITAP33076 TIMM8BP2-201ENST00000445940 251 ntBASIC7.22□□□□□ -1.25
CIITAP33076 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.22□□□□□ -1.25
CIITAP33076 RN7SL552P-201ENST00000462094 276 ntBASIC7.22□□□□□ -1.25
CIITAP33076 RN7SL362P-201ENST00000494228 267 ntBASIC7.22□□□□□ -1.25
CIITAP33076 RNA5SP206-201ENST00000516703 121 ntBASIC7.22□□□□□ -1.25
CIITAP33076 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC7.22□□□□□ -1.25
CIITAP33076 AC036111.2-201ENST00000533247 901 ntBASIC7.22□□□□□ -1.25
CIITAP33076 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC7.22□□□□□ -1.25
CIITAP33076 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.22□□□□□ -1.25
CIITAP33076 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.22□□□□□ -1.25
CIITAP33076 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
CIITAP33076 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.22□□□□□ -1.25
CIITAP33076 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CIITAP33076 AL008723.3-201ENST00000608926 449 ntBASIC7.22□□□□□ -1.25
CIITAP33076 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.22□□□□□ -1.25
CIITAP33076 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.22□□□□□ -1.25
CIITAP33076 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.22□□□□□ -1.25
CIITAP33076 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC7.22□□□□□ -1.25
CIITAP33076 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms