Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
APOEP02649 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
APOEP02649 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
APOEP02649 RNA5SP188-201ENST00000362916 129 ntBASIC6.77□□□□□ -1.33
APOEP02649 RN7SKP129-201ENST00000410288 299 ntBASIC6.77□□□□□ -1.33
APOEP02649 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.77□□□□□ -1.33
APOEP02649 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.77□□□□□ -1.33
APOEP02649 AL139415.1-201ENST00000424862 352 ntBASIC6.77□□□□□ -1.33
APOEP02649 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.77□□□□□ -1.33
APOEP02649 AC013403.1-201ENST00000436954 263 ntBASIC6.77□□□□□ -1.33
APOEP02649 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
APOEP02649 AC236972.4-201ENST00000458091 963 ntBASIC6.77□□□□□ -1.33
APOEP02649 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.77□□□□□ -1.33
APOEP02649 AC022415.1-202ENST00000486612 523 ntBASIC6.77□□□□□ -1.33
APOEP02649 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
APOEP02649 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.77□□□□□ -1.33
APOEP02649 KCTD9P4-201ENST00000526766 1166 ntBASIC6.77□□□□□ -1.33
APOEP02649 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
APOEP02649 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.77□□□□□ -1.33
APOEP02649 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.77□□□□□ -1.33
APOEP02649 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.77□□□□□ -1.33
APOEP02649 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.77□□□□□ -1.33
APOEP02649 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.77□□□□□ -1.33
APOEP02649 AC133552.4-201ENST00000576103 676 ntBASIC6.77□□□□□ -1.33
APOEP02649 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.77□□□□□ -1.33
APOEP02649 AC097467.4-201ENST00000605504 141 ntBASIC6.77□□□□□ -1.33
APOEP02649 AC019257.2-201ENST00000605539 497 ntBASIC6.77□□□□□ -1.33
APOEP02649 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.77□□□□□ -1.33
APOEP02649 MIR6085-201ENST00000618314 110 ntBASIC6.77□□□□□ -1.33
APOEP02649 AP001264.1-201ENST00000620602 703 ntBASIC6.77□□□□□ -1.33
APOEP02649 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.77□□□□□ -1.33
APOEP02649 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
APOEP02649 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
APOEP02649 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.77□□□□□ -1.33
APOEP02649 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
APOEP02649 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
APOEP02649 AC062022.1-201ENST00000451026 1684 ntBASIC6.77□□□□□ -1.33
APOEP02649 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.77□□□□□ -1.33
APOEP02649 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
APOEP02649 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.76□□□□□ -1.33
APOEP02649 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
APOEP02649 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
APOEP02649 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
APOEP02649 SAMMSON-210ENST00000641260 1308 ntBASIC6.76□□□□□ -1.33
APOEP02649 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.76□□□□□ -1.33
APOEP02649 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
APOEP02649 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
APOEP02649 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.76□□□□□ -1.33
APOEP02649 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
APOEP02649 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.76□□□□□ -1.33
APOEP02649 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.76□□□□□ -1.33
APOEP02649 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
APOEP02649 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
APOEP02649 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
APOEP02649 RNA5SP485-201ENST00000365053 119 ntBASIC6.76□□□□□ -1.33
APOEP02649 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
APOEP02649 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
APOEP02649 AL133260.1-201ENST00000405720 405 ntBASIC6.76□□□□□ -1.33
APOEP02649 MRPS21P5-201ENST00000417885 231 ntBASIC6.76□□□□□ -1.33
APOEP02649 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.76□□□□□ -1.33
APOEP02649 RPL23AP85-201ENST00000421838 433 ntBASIC6.76□□□□□ -1.33
APOEP02649 FAM183DP-201ENST00000421987 399 ntBASIC6.76□□□□□ -1.33
APOEP02649 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
APOEP02649 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.76□□□□□ -1.33
APOEP02649 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.76□□□□□ -1.33
APOEP02649 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.76□□□□□ -1.33
APOEP02649 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.76□□□□□ -1.33
APOEP02649 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.76□□□□□ -1.33
APOEP02649 OR52K3P-201ENST00000531655 943 ntBASIC6.76□□□□□ -1.33
APOEP02649 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
APOEP02649 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.76□□□□□ -1.33
APOEP02649 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
APOEP02649 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.76□□□□□ -1.33
APOEP02649 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.76□□□□□ -1.33
APOEP02649 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.76□□□□□ -1.33
APOEP02649 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.76□□□□□ -1.33
APOEP02649 NDUFB9P1-201ENST00000604683 510 ntBASIC6.76□□□□□ -1.33
APOEP02649 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.76□□□□□ -1.33
APOEP02649 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.76□□□□□ -1.33
APOEP02649 MRPL57P1-201ENST00000621486 265 ntBASIC6.76□□□□□ -1.33
APOEP02649 AC089999.3-201ENST00000622440 577 ntBASIC6.76□□□□□ -1.33
APOEP02649 AC063952.1-203ENST00000634410 658 ntBASIC6.76□□□□□ -1.33
APOEP02649 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
APOEP02649 AL355377.1-201ENST00000621125 1653 ntBASIC6.76□□□□□ -1.33
APOEP02649 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
APOEP02649 AC127024.8-201ENST00000623719 2094 ntBASIC6.76□□□□□ -1.33
APOEP02649 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
APOEP02649 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.76□□□□□ -1.33
APOEP02649 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
APOEP02649 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.76□□□□□ -1.33
APOEP02649 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
APOEP02649 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
APOEP02649 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
APOEP02649 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.76□□□□□ -1.33
APOEP02649 AC009779.8-201ENST00000641684 4384 ntBASIC6.76□□□□□ -1.33
APOEP02649 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.76□□□□□ -1.33
APOEP02649 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
APOEP02649 DOCK11P1-201ENST00000553480 5932 ntBASIC6.75□□□□□ -1.33
APOEP02649 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
APOEP02649 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms