Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC034229.6-201ENST00000623704 224 ntBASIC10.83□□□□□ -0.68
CUX2O14529 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CUX2O14529 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC10.83□□□□□ -0.68
CUX2O14529 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CUX2O14529 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CUX2O14529 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CUX2O14529 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CUX2O14529 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CUX2O14529 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CUX2O14529 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
CUX2O14529 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CUX2O14529 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
CUX2O14529 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
CUX2O14529 AC245096.1-201ENST00000413104 546 ntBASIC10.82□□□□□ -0.68
CUX2O14529 AL122020.1-201ENST00000472287 459 ntBASIC10.82□□□□□ -0.68
CUX2O14529 AL355032.1-201ENST00000472981 438 ntBASIC10.82□□□□□ -0.68
CUX2O14529 RPL7AP6-201ENST00000477943 801 ntBASIC10.82□□□□□ -0.68
CUX2O14529 AC253576.1-201ENST00000511645 1156 ntBASIC10.82□□□□□ -0.68
CUX2O14529 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC10.82□□□□□ -0.68
CUX2O14529 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC10.82□□□□□ -0.68
CUX2O14529 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CUX2O14529 AC079753.1-201ENST00000623243 3868 ntBASIC10.82□□□□□ -0.68
CUX2O14529 AP003972.1-201ENST00000625192 5446 ntBASIC10.82□□□□□ -0.68
CUX2O14529 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CUX2O14529 USP46-202ENST00000451218 4622 ntTSL 5 BASIC10.82□□□□□ -0.68
CUX2O14529 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC10.82□□□□□ -0.68
CUX2O14529 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CUX2O14529 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CUX2O14529 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CUX2O14529 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC10.82□□□□□ -0.68
CUX2O14529 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CUX2O14529 AL139805.2-201ENST00000455305 2433 ntBASIC10.82□□□□□ -0.68
CUX2O14529 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC10.82□□□□□ -0.68
CUX2O14529 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CUX2O14529 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC10.81□□□□□ -0.68
CUX2O14529 AL596448.1-201ENST00000415024 392 ntBASIC10.81□□□□□ -0.68
CUX2O14529 FTH1P10-202ENST00000430907 550 ntBASIC10.81□□□□□ -0.68
CUX2O14529 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC10.81□□□□□ -0.68
CUX2O14529 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC10.81□□□□□ -0.68
CUX2O14529 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
CUX2O14529 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC10.81□□□□□ -0.68
CUX2O14529 AL591167.1-201ENST00000607321 456 ntBASIC10.81□□□□□ -0.68
CUX2O14529 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CUX2O14529 AC090510.2-201ENST00000617465 629 ntBASIC10.81□□□□□ -0.68
CUX2O14529 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC10.81□□□□□ -0.68
CUX2O14529 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CUX2O14529 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC10.81□□□□□ -0.68
CUX2O14529 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CUX2O14529 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CUX2O14529 AC122713.2-201ENST00000624942 3335 ntBASIC10.81□□□□□ -0.68
CUX2O14529 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CUX2O14529 WDR95P-201ENST00000425638 1542 ntBASIC10.81□□□□□ -0.68
CUX2O14529 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CUX2O14529 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC10.81□□□□□ -0.68
CUX2O14529 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CUX2O14529 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CUX2O14529 AC009948.5-201ENST00000624360 4406 ntBASIC10.81□□□□□ -0.68
CUX2O14529 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CUX2O14529 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
CUX2O14529 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CUX2O14529 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CUX2O14529 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CUX2O14529 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC10.81□□□□□ -0.68
CUX2O14529 PSMC1P2-201ENST00000423961 1204 ntBASIC10.81□□□□□ -0.68
CUX2O14529 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC10.81□□□□□ -0.68
CUX2O14529 GEMIN2P1-201ENST00000454246 752 ntBASIC10.81□□□□□ -0.68
CUX2O14529 MGST2-204ENST00000506797 634 ntTSL 2 BASIC10.81□□□□□ -0.68
CUX2O14529 AP000676.2-201ENST00000529711 301 ntBASIC10.81□□□□□ -0.68
CUX2O14529 AL157899.1-201ENST00000604110 936 ntBASIC10.81□□□□□ -0.68
CUX2O14529 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
CUX2O14529 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CUX2O14529 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CUX2O14529 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
CUX2O14529 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC10.8□□□□□ -0.68
CUX2O14529 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CUX2O14529 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CUX2O14529 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CUX2O14529 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
CUX2O14529 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CUX2O14529 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CUX2O14529 AL161756.3-201ENST00000641216 2071 ntBASIC10.8□□□□□ -0.68
CUX2O14529 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CUX2O14529 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CUX2O14529 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CUX2O14529 AC127526.2-201ENST00000426436 775 ntBASIC10.8□□□□□ -0.68
CUX2O14529 CYP4F32P-201ENST00000426492 504 ntBASIC10.8□□□□□ -0.68
CUX2O14529 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC10.8□□□□□ -0.68
CUX2O14529 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC10.8□□□□□ -0.68
CUX2O14529 RPL7P61-201ENST00000451721 751 ntBASIC10.8□□□□□ -0.68
CUX2O14529 RN7SL326P-201ENST00000477493 296 ntBASIC10.8□□□□□ -0.68
CUX2O14529 AC092865.4-201ENST00000477936 615 ntBASIC10.8□□□□□ -0.68
CUX2O14529 RPL7P6-201ENST00000480903 738 ntBASIC10.8□□□□□ -0.68
CUX2O14529 AC005244.1-201ENST00000582566 339 ntBASIC10.8□□□□□ -0.68
CUX2O14529 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CUX2O14529 AL139407.1-201ENST00000613826 1175 ntBASIC10.8□□□□□ -0.68
CUX2O14529 AC245389.2-201ENST00000616023 576 ntBASIC10.8□□□□□ -0.68
CUX2O14529 AC242843.1-201ENST00000618702 573 ntBASIC10.8□□□□□ -0.68
CUX2O14529 CU639417.4-201ENST00000623928 207 ntBASIC10.8□□□□□ -0.68
CUX2O14529 AC245060.6-201ENST00000624350 8420 ntBASIC10.8□□□□□ -0.68
CUX2O14529 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms