Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 PSMC1P6-201ENST00000477233 1319 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AC018628.1-201ENST00000624147 3819 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 HSPD1P8-201ENST00000400121 1658 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AC068769.1-201ENST00000474767 2426 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AC005225.5-201ENST00000623547 2225 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AC023245.2-201ENST00000530760 2978 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 RN7SKP191-201ENST00000364713 306 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 RNA5SP231-201ENST00000410496 138 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 TMA16P2-201ENST00000413187 601 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AL672212.1-201ENST00000422246 400 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AL121578.2-201ENST00000448797 447 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 TVP23CP1-201ENST00000450317 639 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AC009244.1-201ENST00000450566 258 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 SLAMF6P1-201ENST00000451067 602 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AL354872.1-201ENST00000456361 967 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 TREML3P-201ENST00000457327 501 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 SCARNA11.1-201ENST00000516918 132 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AP004607.5-201ENST00000532034 217 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 RPS4XP21-201ENST00000603814 750 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AL078624.2-201ENST00000605063 554 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 Z93930.3-201ENST00000607919 749 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AL445649.1-201ENST00000615941 691 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AL121936.2-201ENST00000641935 662 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AL442128.2-201ENST00000620246 1824 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RHBDD3Q9Y3P4 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 AC009220.2-201ENST00000489759 1751 ntBASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 MIR431-201ENST00000385266 114 ntBASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 OR52I1-201ENST00000450052 1050 ntBASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 EIF3LP2-201ENST00000457262 807 ntBASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 AC099340.1-201ENST00000475247 599 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms