Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 RNU1-55P-201ENST00000365510 158 ntBASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 RNA5SP297-201ENST00000391029 113 ntBASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 RN7SKP89-201ENST00000410774 242 ntBASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 HBBP1-201ENST00000433329 439 ntBASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 USP24P1-201ENST00000433802 779 ntBASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AL663074.2-201ENST00000440621 479 ntBASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AC002553.1-201ENST00000442828 802 ntBASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 MYL6P4-201ENST00000477911 453 ntBASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AC091965.3-201ENST00000506236 208 ntBASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AC111000.6-201ENST00000514471 709 ntBASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AC100854.1-201ENST00000520351 341 ntBASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 LINC02178-201ENST00000566876 425 ntTSL 3 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AL035410.2-201ENST00000604963 864 ntBASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 RN7SL126P-201ENST00000616400 299 ntBASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AC116667.2-201ENST00000641075 823 ntBASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 OR2A3P-202ENST00000641249 1776 ntBASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 AC102941.1-201ENST00000567616 1537 ntBASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 MRRFP1-201ENST00000435941 1675 ntBASIC5.79□□□□□ -1.48
CROCCP3Q8IVE0 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 NEK2P2-201ENST00000438441 1338 ntBASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 U3.10-201ENST00000364459 214 ntBASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 RN7SKP55-201ENST00000364888 307 ntBASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 AL358178.1-201ENST00000407698 397 ntBASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 AC013268.2-201ENST00000420753 337 ntBASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 GAPDHP57-201ENST00000424400 585 ntBASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 TRGV7-201ENST00000427089 353 ntBASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 AL645936.2-201ENST00000430565 928 ntBASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 AC073410.1-201ENST00000435125 589 ntBASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 AC099670.2-201ENST00000435130 321 ntBASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 RPE-213ENST00000445268 668 ntTSL 5 BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 AL354714.5-201ENST00000450131 590 ntBASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 AL133480.2-201ENST00000456723 487 ntBASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 RNA5SP518-201ENST00000515957 119 ntBASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 C8orf87-201ENST00000521906 588 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 AL359219.2-201ENST00000555184 348 ntBASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC5.78□□□□□ -1.48
CROCCP3Q8IVE0 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms