Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 LCN1P2-201ENST00000372030 223 ntBASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 AC091390.2-201ENST00000432573 374 ntBASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 SOCS5P1-201ENST00000440415 949 ntBASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 PPIAP7-201ENST00000454070 489 ntBASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 AC094085.1-201ENST00000468914 584 ntBASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 RPL34P33-201ENST00000486062 334 ntBASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 AC117395.1-201ENST00000487390 403 ntBASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 AC095057.1-201ENST00000507583 168 ntBASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 TRIM77BP-201ENST00000524985 1119 ntBASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 AP000620.1-201ENST00000527147 504 ntBASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 AC007346.1-201ENST00000569208 867 ntBASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 LINC00556-201ENST00000569603 412 ntBASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 AC067773.1-201ENST00000603284 1094 ntBASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 AC062029.1-202ENST00000606164 3651 ntBASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 AC119674.1-204ENST00000641348 1343 ntBASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM1Q2M3G4 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
SHROOM1Q2M3G4 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.21
SHROOM1Q2M3G4 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SHROOM1Q2M3G4 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SHROOM1Q2M3G4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SHROOM1Q2M3G4 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
SHROOM1Q2M3G4 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.46□□□□□ -1.21
SHROOM1Q2M3G4 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.46□□□□□ -1.21
SHROOM1Q2M3G4 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SHROOM1Q2M3G4 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 AC096537.2-201ENST00000413707 714 ntBASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 AL139156.3-201ENST00000454802 394 ntBASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 RN7SL643P-201ENST00000471845 291 ntBASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 RN7SKP238-201ENST00000516483 249 ntBASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 AL359704.2-201ENST00000604335 521 ntBASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 AL591167.1-201ENST00000607321 456 ntBASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 AC092266.1-201ENST00000610958 165 ntBASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SHROOM1Q2M3G4 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 SNORD16-201ENST00000362803 99 ntBASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 RN7SKP121-201ENST00000410842 305 ntBASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 VDAC1P2-201ENST00000423609 850 ntBASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 AC002486.2-201ENST00000447806 590 ntBASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 AC068228.1-201ENST00000461723 211 ntBASIC7.45□□□□□ -1.22
SHROOM1Q2M3G4 UGT2A3P7-201ENST00000510485 734 ntBASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms