Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SMARCA4P51532 RN7SKP77-201ENST00000363261 353 ntBASIC11□□□□□ -0.65
SMARCA4P51532 NANOGP4-201ENST00000427230 913 ntBASIC11□□□□□ -0.65
SMARCA4P51532 EEF1B2P6-201ENST00000445713 673 ntBASIC11□□□□□ -0.65
SMARCA4P51532 DUTP7-201ENST00000507982 486 ntBASIC11□□□□□ -0.65
SMARCA4P51532 AC074087.1-201ENST00000512059 724 ntBASIC11□□□□□ -0.65
SMARCA4P51532 WBP1LP3-201ENST00000523033 208 ntBASIC11□□□□□ -0.65
SMARCA4P51532 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC11□□□□□ -0.65
SMARCA4P51532 AC024940.4-201ENST00000605507 246 ntBASIC11□□□□□ -0.65
SMARCA4P51532 AL021918.2-201ENST00000613415 194 ntBASIC11□□□□□ -0.65
SMARCA4P51532 AC116631.1-202ENST00000640984 683 ntBASIC11□□□□□ -0.65
SMARCA4P51532 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
SMARCA4P51532 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
SMARCA4P51532 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SMARCA4P51532 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC10.99□□□□□ -0.65
SMARCA4P51532 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
SMARCA4P51532 AL096829.1-201ENST00000413677 457 ntBASIC10.99□□□□□ -0.65
SMARCA4P51532 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC10.99□□□□□ -0.65
SMARCA4P51532 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC10.99□□□□□ -0.65
SMARCA4P51532 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC10.99□□□□□ -0.65
SMARCA4P51532 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC10.99□□□□□ -0.65
SMARCA4P51532 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC10.99□□□□□ -0.65
SMARCA4P51532 MIR193BHG-214ENST00000641765 509 ntBASIC10.99□□□□□ -0.65
SMARCA4P51532 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SMARCA4P51532 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SMARCA4P51532 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SMARCA4P51532 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.65
SMARCA4P51532 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC10.99□□□□□ -0.65
SMARCA4P51532 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SMARCA4P51532 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC10.99□□□□□ -0.65
SMARCA4P51532 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
SMARCA4P51532 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
SMARCA4P51532 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SMARCA4P51532 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SMARCA4P51532 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SMARCA4P51532 RNA5SP394-201ENST00000364216 119 ntBASIC10.98□□□□□ -0.65
SMARCA4P51532 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC10.98□□□□□ -0.65
SMARCA4P51532 AC016739.1-201ENST00000405359 345 ntBASIC10.98□□□□□ -0.65
SMARCA4P51532 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC10.98□□□□□ -0.65
SMARCA4P51532 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC10.98□□□□□ -0.65
SMARCA4P51532 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC10.98□□□□□ -0.65
SMARCA4P51532 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC10.98□□□□□ -0.65
SMARCA4P51532 AL133445.1-201ENST00000467051 452 ntBASIC10.98□□□□□ -0.65
SMARCA4P51532 AC108693.1-201ENST00000496068 432 ntBASIC10.98□□□□□ -0.65
SMARCA4P51532 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC10.98□□□□□ -0.65
SMARCA4P51532 AC015818.6-201ENST00000584274 634 ntBASIC10.98□□□□□ -0.65
SMARCA4P51532 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC10.98□□□□□ -0.65
SMARCA4P51532 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
SMARCA4P51532 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
SMARCA4P51532 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC10.98□□□□□ -0.65
SMARCA4P51532 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC10.98□□□□□ -0.65
SMARCA4P51532 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC10.98□□□□□ -0.65
SMARCA4P51532 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
SMARCA4P51532 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SMARCA4P51532 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC10.98□□□□□ -0.65
SMARCA4P51532 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
SMARCA4P51532 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMARCA4P51532 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
SMARCA4P51532 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC10.98□□□□□ -0.65
SMARCA4P51532 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SMARCA4P51532 AC241584.2-201ENST00000637142 2090 ntBASIC10.98□□□□□ -0.65
SMARCA4P51532 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC10.98□□□□□ -0.65
SMARCA4P51532 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC10.98□□□□□ -0.65
SMARCA4P51532 AC009120.2-204ENST00000621548 2032 ntBASIC10.98□□□□□ -0.65
SMARCA4P51532 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMARCA4P51532 RN7SKP124-201ENST00000364730 341 ntBASIC10.98□□□□□ -0.65
SMARCA4P51532 RPS15AP30-201ENST00000420976 390 ntBASIC10.98□□□□□ -0.65
SMARCA4P51532 NMD3P2-201ENST00000421815 761 ntBASIC10.98□□□□□ -0.65
SMARCA4P51532 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC10.98□□□□□ -0.65
SMARCA4P51532 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC10.98□□□□□ -0.65
SMARCA4P51532 RN7SL72P-201ENST00000460697 269 ntBASIC10.98□□□□□ -0.65
SMARCA4P51532 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC10.98□□□□□ -0.65
SMARCA4P51532 AP005639.1-201ENST00000526939 192 ntBASIC10.98□□□□□ -0.65
SMARCA4P51532 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC10.98□□□□□ -0.65
SMARCA4P51532 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
SMARCA4P51532 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC10.98□□□□□ -0.65
SMARCA4P51532 GMFG-212ENST00000602185 423 ntTSL 3 BASIC10.98□□□□□ -0.65
SMARCA4P51532 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
SMARCA4P51532 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC10.98□□□□□ -0.65
SMARCA4P51532 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
SMARCA4P51532 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC10.97□□□□□ -0.65
SMARCA4P51532 PDZK1P1-202ENST00000425209 1350 ntBASIC10.97□□□□□ -0.65
SMARCA4P51532 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC10.97□□□□□ -0.65
SMARCA4P51532 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
SMARCA4P51532 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMARCA4P51532 AC092111.1-201ENST00000618256 3358 ntBASIC10.97□□□□□ -0.65
SMARCA4P51532 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
SMARCA4P51532 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
SMARCA4P51532 SPTLC1P2-201ENST00000407089 121 ntBASIC10.97□□□□□ -0.65
SMARCA4P51532 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC10.97□□□□□ -0.65
SMARCA4P51532 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC10.97□□□□□ -0.65
SMARCA4P51532 AC110056.1-201ENST00000525759 911 ntBASIC10.97□□□□□ -0.65
SMARCA4P51532 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC10.97□□□□□ -0.65
SMARCA4P51532 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SMARCA4P51532 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMARCA4P51532 ING3-204ENST00000431467 1447 ntTSL 2 BASIC10.97□□□□□ -0.65
SMARCA4P51532 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SMARCA4P51532 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMARCA4P51532 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMARCA4P51532 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms