Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC108103.1-201ENST00000511286 446 ntBASIC6.79□□□□□ -1.32
LHX1P48742 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.79□□□□□ -1.32
LHX1P48742 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.79□□□□□ -1.32
LHX1P48742 AC087360.1-201ENST00000518788 616 ntBASIC6.79□□□□□ -1.32
LHX1P48742 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.79□□□□□ -1.32
LHX1P48742 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LHX1P48742 AC009729.1-201ENST00000548873 1133 ntBASIC6.79□□□□□ -1.32
LHX1P48742 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
LHX1P48742 OR1E3-201ENST00000575608 948 ntBASIC6.79□□□□□ -1.32
LHX1P48742 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.79□□□□□ -1.32
LHX1P48742 AC005332.4-201ENST00000592752 579 ntBASIC6.79□□□□□ -1.32
LHX1P48742 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.79□□□□□ -1.32
LHX1P48742 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.79□□□□□ -1.32
LHX1P48742 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.79□□□□□ -1.32
LHX1P48742 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.79□□□□□ -1.32
LHX1P48742 AL683826.1-201ENST00000624104 627 ntBASIC6.79□□□□□ -1.32
LHX1P48742 OR7E91P-202ENST00000642062 1198 ntBASIC6.79□□□□□ -1.32
LHX1P48742 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LHX1P48742 BRD7P1-201ENST00000557705 1915 ntBASIC6.79□□□□□ -1.32
LHX1P48742 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
LHX1P48742 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
LHX1P48742 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LHX1P48742 UGT2B27P-201ENST00000505092 1620 ntBASIC6.79□□□□□ -1.32
LHX1P48742 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LHX1P48742 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LHX1P48742 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LHX1P48742 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LHX1P48742 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LHX1P48742 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LHX1P48742 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.78□□□□□ -1.32
LHX1P48742 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
LHX1P48742 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LHX1P48742 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.78□□□□□ -1.32
LHX1P48742 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.78□□□□□ -1.32
LHX1P48742 MAPK10-365ENST00000641902 3825 ntBASIC6.78□□□□□ -1.32
LHX1P48742 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
LHX1P48742 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LHX1P48742 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
LHX1P48742 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LHX1P48742 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
LHX1P48742 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
LHX1P48742 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.78□□□□□ -1.32
LHX1P48742 RN7SKP237-201ENST00000364663 301 ntBASIC6.78□□□□□ -1.32
LHX1P48742 AL157702.1-201ENST00000398764 426 ntBASIC6.78□□□□□ -1.32
LHX1P48742 YWHAZP6-201ENST00000399764 738 ntBASIC6.78□□□□□ -1.32
LHX1P48742 MIR1275-201ENST00000408770 80 ntBASIC6.78□□□□□ -1.32
LHX1P48742 RPL7AP14-201ENST00000424041 802 ntBASIC6.78□□□□□ -1.32
LHX1P48742 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LHX1P48742 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.78□□□□□ -1.32
LHX1P48742 GAPDHP59-201ENST00000435908 267 ntBASIC6.78□□□□□ -1.32
LHX1P48742 SOCS5P1-201ENST00000440415 949 ntBASIC6.78□□□□□ -1.32
LHX1P48742 CT45A11P-201ENST00000448043 1134 ntBASIC6.78□□□□□ -1.32
LHX1P48742 OR52E7P-201ENST00000452394 933 ntBASIC6.78□□□□□ -1.32
LHX1P48742 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.78□□□□□ -1.32
LHX1P48742 RN7SL104P-201ENST00000498686 293 ntBASIC6.78□□□□□ -1.32
LHX1P48742 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.78□□□□□ -1.32
LHX1P48742 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.78□□□□□ -1.32
LHX1P48742 AC010343.2-201ENST00000510162 224 ntBASIC6.78□□□□□ -1.32
LHX1P48742 AC018797.1-201ENST00000510791 255 ntBASIC6.78□□□□□ -1.32
LHX1P48742 ZNF519P4-201ENST00000514008 125 ntBASIC6.78□□□□□ -1.32
LHX1P48742 RNA5SP473-201ENST00000516402 125 ntBASIC6.78□□□□□ -1.32
LHX1P48742 RNA5SP441-201ENST00000516809 88 ntBASIC6.78□□□□□ -1.32
LHX1P48742 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.78□□□□□ -1.32
LHX1P48742 NPIPB14P-203ENST00000532298 987 ntBASIC6.78□□□□□ -1.32
LHX1P48742 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.78□□□□□ -1.32
LHX1P48742 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.78□□□□□ -1.32
LHX1P48742 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.78□□□□□ -1.32
LHX1P48742 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.78□□□□□ -1.32
LHX1P48742 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.78□□□□□ -1.32
LHX1P48742 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.78□□□□□ -1.32
LHX1P48742 AL139041.1-201ENST00000605480 610 ntBASIC6.78□□□□□ -1.32
LHX1P48742 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.78□□□□□ -1.32
LHX1P48742 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.78□□□□□ -1.32
LHX1P48742 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
LHX1P48742 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.78□□□□□ -1.32
LHX1P48742 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
LHX1P48742 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.78□□□□□ -1.32
LHX1P48742 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LHX1P48742 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
LHX1P48742 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LHX1P48742 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.78□□□□□ -1.32
LHX1P48742 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
LHX1P48742 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.77□□□□□ -1.32
LHX1P48742 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
LHX1P48742 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
LHX1P48742 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.77□□□□□ -1.33
LHX1P48742 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LHX1P48742 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
LHX1P48742 AC018765.1-201ENST00000623357 3446 ntBASIC6.77□□□□□ -1.33
LHX1P48742 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LHX1P48742 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
LHX1P48742 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LHX1P48742 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
LHX1P48742 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.77□□□□□ -1.33
LHX1P48742 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LHX1P48742 RNU1-65P-201ENST00000363919 148 ntBASIC6.77□□□□□ -1.33
LHX1P48742 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LHX1P48742 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
LHX1P48742 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
LHX1P48742 AC108479.1-201ENST00000431142 427 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms