Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.39□□□□□ -1.39
HNF4AP41235 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HNF4AP41235 AL590399.4-201ENST00000436561 601 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 HMGN1P32-201ENST00000441744 256 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 AL161722.1-201ENST00000446972 1032 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.39□□□□□ -1.39
HNF4AP41235 TRBV8-1-201ENST00000481590 279 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.39□□□□□ -1.39
HNF4AP41235 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.39□□□□□ -1.39
HNF4AP41235 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.39□□□□□ -1.39
HNF4AP41235 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.39□□□□□ -1.39
HNF4AP41235 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.39□□□□□ -1.39
HNF4AP41235 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.39□□□□□ -1.39
HNF4AP41235 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.39□□□□□ -1.39
HNF4AP41235 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.39□□□□□ -1.39
HNF4AP41235 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.39□□□□□ -1.39
HNF4AP41235 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.39□□□□□ -1.39
HNF4AP41235 RPS4XP21-201ENST00000603814 750 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 MIR6849-201ENST00000618543 69 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 MIR7854-201ENST00000620068 65 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.39□□□□□ -1.39
HNF4AP41235 AC091059.2-201ENST00000623355 614 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
HNF4AP41235 AC114546.4-201ENST00000624413 369 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 AC061999.1-201ENST00000624454 177 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 AL035425.4-201ENST00000624509 1063 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.39□□□□□ -1.39
HNF4AP41235 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.39□□□□□ -1.39
HNF4AP41235 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HNF4AP41235 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
HNF4AP41235 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HNF4AP41235 AC010132.4-201ENST00000569883 1368 ntBASIC6.39□□□□□ -1.39
HNF4AP41235 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.39□□□□□ -1.39
HNF4AP41235 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HNF4AP41235 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.39□□□□□ -1.39
HNF4AP41235 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HNF4AP41235 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
HNF4AP41235 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HNF4AP41235 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HNF4AP41235 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.38□□□□□ -1.39
HNF4AP41235 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HNF4AP41235 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HNF4AP41235 ZNF402P-201ENST00000404435 3100 ntBASIC6.38□□□□□ -1.39
HNF4AP41235 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HNF4AP41235 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HNF4AP41235 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HNF4AP41235 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HNF4AP41235 AL731556.1-201ENST00000394628 3711 ntBASIC6.38□□□□□ -1.39
HNF4AP41235 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HNF4AP41235 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.38□□□□□ -1.39
HNF4AP41235 AL451142.1-201ENST00000375867 775 ntBASIC6.38□□□□□ -1.39
HNF4AP41235 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HNF4AP41235 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.38□□□□□ -1.39
HNF4AP41235 AL929472.1-201ENST00000417484 429 ntBASIC6.38□□□□□ -1.39
HNF4AP41235 PTPN2P1-201ENST00000423212 1072 ntBASIC6.38□□□□□ -1.39
HNF4AP41235 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.38□□□□□ -1.39
HNF4AP41235 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.38□□□□□ -1.39
HNF4AP41235 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HNF4AP41235 PPIAP32-201ENST00000449940 472 ntBASIC6.38□□□□□ -1.39
HNF4AP41235 TVP23CP1-201ENST00000450317 639 ntBASIC6.38□□□□□ -1.39
HNF4AP41235 RN7SL267P-201ENST00000485107 261 ntBASIC6.38□□□□□ -1.39
HNF4AP41235 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.38□□□□□ -1.39
HNF4AP41235 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.38□□□□□ -1.39
HNF4AP41235 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.38□□□□□ -1.39
HNF4AP41235 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.38□□□□□ -1.39
HNF4AP41235 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
HNF4AP41235 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.38□□□□□ -1.39
HNF4AP41235 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.38□□□□□ -1.39
HNF4AP41235 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.38□□□□□ -1.39
HNF4AP41235 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.38□□□□□ -1.39
HNF4AP41235 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.38□□□□□ -1.39
HNF4AP41235 BUB1P1-201ENST00000603541 607 ntBASIC6.38□□□□□ -1.39
HNF4AP41235 AL157899.1-201ENST00000604110 936 ntBASIC6.38□□□□□ -1.39
HNF4AP41235 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.38□□□□□ -1.39
HNF4AP41235 AL352984.2-201ENST00000611153 546 ntBASIC6.38□□□□□ -1.39
HNF4AP41235 MIR6774-201ENST00000614651 70 ntBASIC6.38□□□□□ -1.39
HNF4AP41235 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HNF4AP41235 AC005514.1-201ENST00000623521 208 ntBASIC6.38□□□□□ -1.39
HNF4AP41235 AC010624.4-201ENST00000597606 1351 ntBASIC6.38□□□□□ -1.39
HNF4AP41235 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.38□□□□□ -1.39
HNF4AP41235 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.38□□□□□ -1.39
HNF4AP41235 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.38□□□□□ -1.39
HNF4AP41235 AC073365.1-203ENST00000641055 1992 ntBASIC6.38□□□□□ -1.39
HNF4AP41235 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.38□□□□□ -1.39
HNF4AP41235 AC034229.2-201ENST00000566945 2508 ntBASIC6.38□□□□□ -1.39
HNF4AP41235 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HNF4AP41235 AC005332.9-201ENST00000620266 2921 ntBASIC6.38□□□□□ -1.39
HNF4AP41235 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.38□□□□□ -1.39
HNF4AP41235 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
HNF4AP41235 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HNF4AP41235 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HNF4AP41235 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HNF4AP41235 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HNF4AP41235 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HNF4AP41235 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HNF4AP41235 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HNF4AP41235 AC023245.2-201ENST00000530760 2978 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HNF4AP41235 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms