Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.78□□□□□ -1.16
CNGA1P29973 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC7.78□□□□□ -1.16
CNGA1P29973 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.78□□□□□ -1.16
CNGA1P29973 AC006328.2-201ENST00000623198 397 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 AC012005.2-201ENST00000624333 397 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 AC097372.4-201ENST00000625025 466 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC7.78□□□□□ -1.16
CNGA1P29973 AP001052.1-201ENST00000626421 99 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.78□□□□□ -1.16
CNGA1P29973 CASC19-212ENST00000641153 1287 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CNGA1P29973 AC087269.2-201ENST00000641764 975 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.78□□□□□ -1.16
CNGA1P29973 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CNGA1P29973 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.78□□□□□ -1.16
CNGA1P29973 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CNGA1P29973 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CNGA1P29973 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
CNGA1P29973 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CNGA1P29973 AL121949.2-201ENST00000403446 1548 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 CASC19-243ENST00000641588 1546 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CNGA1P29973 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CNGA1P29973 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.16
CNGA1P29973 AC005614.1-201ENST00000598952 3653 ntBASIC7.77□□□□□ -1.16
CNGA1P29973 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.16
CNGA1P29973 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CNGA1P29973 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CNGA1P29973 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CNGA1P29973 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
CNGA1P29973 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.77□□□□□ -1.17
CNGA1P29973 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CNGA1P29973 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CNGA1P29973 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.77□□□□□ -1.17
CNGA1P29973 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CNGA1P29973 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CNGA1P29973 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CNGA1P29973 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CNGA1P29973 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CNGA1P29973 PSMA6P1-201ENST00000400275 741 ntBASIC7.77□□□□□ -1.17
CNGA1P29973 VIM2P-201ENST00000402383 1294 ntBASIC7.77□□□□□ -1.17
CNGA1P29973 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CNGA1P29973 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC7.77□□□□□ -1.17
CNGA1P29973 RPL17P17-201ENST00000419491 557 ntBASIC7.77□□□□□ -1.17
CNGA1P29973 GPN3P1-201ENST00000423883 535 ntBASIC7.77□□□□□ -1.17
CNGA1P29973 SEC63P1-201ENST00000425785 1258 ntBASIC7.77□□□□□ -1.17
CNGA1P29973 AL121916.1-201ENST00000429405 308 ntBASIC7.77□□□□□ -1.17
CNGA1P29973 SNRPBP1-201ENST00000443634 282 ntBASIC7.77□□□□□ -1.17
CNGA1P29973 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.77□□□□□ -1.17
CNGA1P29973 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.77□□□□□ -1.17
CNGA1P29973 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC7.77□□□□□ -1.17
CNGA1P29973 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC7.77□□□□□ -1.17
CNGA1P29973 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CNGA1P29973 AC007068.2-201ENST00000543168 395 ntBASIC7.77□□□□□ -1.17
CNGA1P29973 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.77□□□□□ -1.17
CNGA1P29973 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC7.77□□□□□ -1.17
CNGA1P29973 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.77□□□□□ -1.17
CNGA1P29973 AC026790.2-201ENST00000606282 430 ntBASIC7.77□□□□□ -1.17
CNGA1P29973 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CNGA1P29973 AC074276.2-201ENST00000619891 348 ntBASIC7.77□□□□□ -1.17
CNGA1P29973 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.77□□□□□ -1.17
CNGA1P29973 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.77□□□□□ -1.17
CNGA1P29973 AC106858.1-201ENST00000637497 429 ntBASIC7.77□□□□□ -1.17
CNGA1P29973 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
CNGA1P29973 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.77□□□□□ -1.17
CNGA1P29973 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CNGA1P29973 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.77□□□□□ -1.17
CNGA1P29973 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CNGA1P29973 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CNGA1P29973 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CNGA1P29973 AP001002.1-201ENST00000625148 1513 ntBASIC7.77□□□□□ -1.17
CNGA1P29973 IFIT1P1-201ENST00000400497 1449 ntBASIC7.77□□□□□ -1.17
CNGA1P29973 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.77□□□□□ -1.17
CNGA1P29973 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CNGA1P29973 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CNGA1P29973 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
CNGA1P29973 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
CNGA1P29973 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.76□□□□□ -1.17
CNGA1P29973 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CNGA1P29973 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC7.76□□□□□ -1.17
CNGA1P29973 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CNGA1P29973 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.76□□□□□ -1.17
CNGA1P29973 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CNGA1P29973 AC098592.2-201ENST00000413158 265 ntBASIC7.76□□□□□ -1.17
CNGA1P29973 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.76□□□□□ -1.17
CNGA1P29973 GSTA6P-201ENST00000424144 582 ntBASIC7.76□□□□□ -1.17
CNGA1P29973 AL590128.1-201ENST00000433407 286 ntBASIC7.76□□□□□ -1.17
CNGA1P29973 AC099340.1-201ENST00000475247 599 ntBASIC7.76□□□□□ -1.17
CNGA1P29973 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.76□□□□□ -1.17
CNGA1P29973 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC7.76□□□□□ -1.17
CNGA1P29973 AC018797.1-201ENST00000510791 255 ntBASIC7.76□□□□□ -1.17
CNGA1P29973 SNX18P23-201ENST00000510867 677 ntBASIC7.76□□□□□ -1.17
CNGA1P29973 AC093664.1-201ENST00000511779 289 ntBASIC7.76□□□□□ -1.17
CNGA1P29973 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.76□□□□□ -1.17
CNGA1P29973 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.76□□□□□ -1.17
CNGA1P29973 AC026826.3-201ENST00000561747 158 ntBASIC7.76□□□□□ -1.17
CNGA1P29973 ACTG1P15-201ENST00000570019 1063 ntBASIC7.76□□□□□ -1.17
CNGA1P29973 AL671309.1-201ENST00000603750 544 ntBASIC7.76□□□□□ -1.17
CNGA1P29973 AC105148.1-201ENST00000604961 409 ntBASIC7.76□□□□□ -1.17
CNGA1P29973 AP002345.2-201ENST00000609961 904 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms