Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 AC073916.1-201ENST00000545095 130 ntBASIC4.93□□□□□ -1.62
HLA-DMBP28068 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DMBP28068 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 AC093524.1-201ENST00000564266 1094 ntBASIC4.93□□□□□ -1.62
HLA-DMBP28068 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 AC024267.2-201ENST00000582737 417 ntBASIC4.93□□□□□ -1.62
HLA-DMBP28068 HTR1DP1-201ENST00000616500 888 ntBASIC4.93□□□□□ -1.62
HLA-DMBP28068 TCL6_3.1-201ENST00000619064 137 ntBASIC4.93□□□□□ -1.62
HLA-DMBP28068 AC004836.1-201ENST00000623032 634 ntBASIC4.93□□□□□ -1.62
HLA-DMBP28068 CLUHP10-201ENST00000631979 980 ntBASIC4.93□□□□□ -1.62
HLA-DMBP28068 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DMBP28068 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DMBP28068 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 AC006511.3-201ENST00000624929 1783 ntBASIC4.93□□□□□ -1.62
HLA-DMBP28068 BX284613.1-201ENST00000452221 1641 ntBASIC4.93□□□□□ -1.62
HLA-DMBP28068 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DMBP28068 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DMBP28068 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DMBP28068 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 AC079248.1-201ENST00000427568 1546 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 IARS-213ENST00000627121 4587 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DMBP28068 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DMBP28068 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DMBP28068 AC092701.1-201ENST00000623627 1551 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DMBP28068 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 RN7SKP191-201ENST00000364713 306 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 SNORA70H-201ENST00000383910 135 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 SNORA70J-201ENST00000384182 135 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 AL050335.1-201ENST00000396909 869 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 RN7SKP91-201ENST00000410852 288 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DMBP28068 AC007568.1-201ENST00000422912 471 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 PTPN2P1-201ENST00000423212 1072 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 RPEP4-201ENST00000437636 602 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 AC083855.1-201ENST00000440041 258 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 DNAJC19P5-201ENST00000443295 316 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DMBP28068 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DMBP28068 MGAT2P1-201ENST00000449718 797 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 TVP23CP1-201ENST00000450317 639 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 RPL5P33-201ENST00000487833 905 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 RPL5P14-201ENST00000494197 878 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 AC022206.1-201ENST00000495947 347 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 OR51A1P-201ENST00000511110 946 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 MINOS1P4-201ENST00000515470 318 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 RNA5SP318-201ENST00000516352 92 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 AP005639.1-201ENST00000526939 192 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 AL162632.2-201ENST00000553933 399 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 AL121579.2-201ENST00000555466 590 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 LAPTM4BP2-201ENST00000604542 446 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 NQO2-209ENST00000606474 470 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 AC024255.1-201ENST00000614376 102 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 U1.41-201ENST00000617626 165 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 AC018659.2-201ENST00000624690 715 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DMBP28068 AC137056.2-201ENST00000624055 1958 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DMBP28068 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 AC067942.1-201ENST00000488045 1493 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DMBP28068 AC011504.1-201ENST00000623331 4103 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 AP000432.2-201ENST00000624164 2048 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DMBP28068 POT1-202ENST00000393329 3950 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DMBP28068 PSMC1P4-201ENST00000515236 1327 ntBASIC4.92□□□□□ -1.62
HLA-DMBP28068 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DMBP28068 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms