Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
NPIPA1Q9UND3 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPIPA1Q9UND3 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.05□□□□□ -1.44
NPIPA1Q9UND3 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPIPA1Q9UND3 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPIPA1Q9UND3 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPIPA1Q9UND3 RPS2P45-201ENST00000469997 2057 ntBASIC6.05□□□□□ -1.44
NPIPA1Q9UND3 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.05□□□□□ -1.44
NPIPA1Q9UND3 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 CYP2G2P-201ENST00000594920 1485 ntBASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 AL360013.1-201ENST00000419031 858 ntBASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 RPS7P12-201ENST00000422385 582 ntBASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 AC093166.3-201ENST00000448785 303 ntBASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 CCNJP2-201ENST00000457810 1163 ntBASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 AC112484.3-201ENST00000505910 329 ntBASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 AL589765.6-201ENST00000601909 549 ntBASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 AL122023.1-201ENST00000622847 530 ntBASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 AC010325.3-201ENST00000641084 394 ntBASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 MAPK10-357ENST00000641831 2858 ntBASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NPIPA1Q9UND3 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 PSMC1P6-201ENST00000477233 1319 ntBASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 SNORA70.3-201ENST00000365075 132 ntBASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 RNA5SP279-201ENST00000365513 117 ntBASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 ARMC4P1-201ENST00000438905 707 ntBASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 RN7SL39P-201ENST00000462264 297 ntBASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 RN7SL561P-201ENST00000488553 281 ntBASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 AC021006.1-201ENST00000489849 553 ntBASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 AC096754.1-201ENST00000508904 818 ntBASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 MAST4-IT1-201ENST00000514241 658 ntBASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 RN7SKP98-201ENST00000517070 156 ntBASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 SYPL1P2-201ENST00000582878 727 ntBASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 MIR6071-201ENST00000616741 78 ntBASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 MIR6721-201ENST00000617181 87 ntBASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 AC114546.4-201ENST00000624413 369 ntBASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 RAD17P2-201ENST00000451754 1977 ntBASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.03□□□□□ -1.44
NPIPA1Q9UND3 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.44
NPIPA1Q9UND3 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.02□□□□□ -1.45
NPIPA1Q9UND3 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
NPIPA1Q9UND3 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms