Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.7□□□□□ -1.18
SNED1Q8TER0 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SNED1Q8TER0 AL953862.2-201ENST00000603089 820 ntBASIC7.7□□□□□ -1.18
SNED1Q8TER0 MIR6793-201ENST00000612376 63 ntBASIC7.7□□□□□ -1.18
SNED1Q8TER0 MIR6826-201ENST00000617808 98 ntBASIC7.7□□□□□ -1.18
SNED1Q8TER0 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.7□□□□□ -1.18
SNED1Q8TER0 AC079776.5-201ENST00000641920 211 ntBASIC7.7□□□□□ -1.18
SNED1Q8TER0 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
SNED1Q8TER0 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SNED1Q8TER0 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
SNED1Q8TER0 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SNED1Q8TER0 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.7□□□□□ -1.18
SNED1Q8TER0 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SNED1Q8TER0 AF287957.1-201ENST00000607368 1595 ntBASIC7.7□□□□□ -1.18
SNED1Q8TER0 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SNED1Q8TER0 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
SNED1Q8TER0 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SNED1Q8TER0 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SNED1Q8TER0 AC005839.1-201ENST00000624148 3213 ntBASIC7.7□□□□□ -1.18
SNED1Q8TER0 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
SNED1Q8TER0 AC119674.1-204ENST00000641348 1343 ntBASIC7.7□□□□□ -1.18
SNED1Q8TER0 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SNED1Q8TER0 AC105114.1-201ENST00000624795 1862 ntBASIC7.7□□□□□ -1.18
SNED1Q8TER0 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
SNED1Q8TER0 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.7□□□□□ -1.18
SNED1Q8TER0 RNA5SP500-201ENST00000364486 119 ntBASIC7.69□□□□□ -1.18
SNED1Q8TER0 MIR937-201ENST00000401271 86 ntBASIC7.69□□□□□ -1.18
SNED1Q8TER0 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 AL512637.1-201ENST00000439523 1231 ntBASIC7.69□□□□□ -1.18
SNED1Q8TER0 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 RN7SL629P-201ENST00000489622 285 ntBASIC7.69□□□□□ -1.18
SNED1Q8TER0 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 AP003396.4-201ENST00000527574 265 ntBASIC7.69□□□□□ -1.18
SNED1Q8TER0 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 AC013244.1-201ENST00000604279 193 ntBASIC7.69□□□□□ -1.18
SNED1Q8TER0 RPL12P48-201ENST00000605620 304 ntBASIC7.69□□□□□ -1.18
SNED1Q8TER0 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 AC245014.3-201ENST00000618589 347 ntBASIC7.69□□□□□ -1.18
SNED1Q8TER0 AC020763.5-201ENST00000623298 430 ntBASIC7.69□□□□□ -1.18
SNED1Q8TER0 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNED1Q8TER0 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNED1Q8TER0 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNED1Q8TER0 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNED1Q8TER0 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNED1Q8TER0 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNED1Q8TER0 CASC19-228ENST00000641414 1684 ntBASIC7.69□□□□□ -1.18
SNED1Q8TER0 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNED1Q8TER0 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNED1Q8TER0 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNED1Q8TER0 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNED1Q8TER0 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNED1Q8TER0 RNU1-49P-201ENST00000363468 159 ntBASIC7.69□□□□□ -1.18
SNED1Q8TER0 SNORA58B-201ENST00000364259 136 ntBASIC7.69□□□□□ -1.18
SNED1Q8TER0 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 VN1R110P-201ENST00000438988 971 ntBASIC7.69□□□□□ -1.18
SNED1Q8TER0 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 RN7SL705P-201ENST00000481678 294 ntBASIC7.69□□□□□ -1.18
SNED1Q8TER0 AC095057.1-201ENST00000507583 168 ntBASIC7.69□□□□□ -1.18
SNED1Q8TER0 AC090958.1-201ENST00000511122 351 ntBASIC7.69□□□□□ -1.18
SNED1Q8TER0 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 ATP5LP3-201ENST00000514223 304 ntBASIC7.69□□□□□ -1.18
SNED1Q8TER0 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.69□□□□□ -1.18
SNED1Q8TER0 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNED1Q8TER0 AC004477.3-201ENST00000614061 590 ntBASIC7.69□□□□□ -1.18
SNED1Q8TER0 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNED1Q8TER0 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SNED1Q8TER0 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SNED1Q8TER0 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SNED1Q8TER0 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNED1Q8TER0 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.68□□□□□ -1.18
SNED1Q8TER0 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SNED1Q8TER0 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNED1Q8TER0 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC7.68□□□□□ -1.18
SNED1Q8TER0 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms