Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 AL121579.2-201ENST00000555466 590 ntBASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 AC012254.5-201ENST00000623573 478 ntBASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 AL132640.3-201ENST00000630473 177 ntBASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 Z95114.1-201ENST00000624264 14574 ntBASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 PARP4P1-201ENST00000435945 2337 ntBASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 AC125238.2-201ENST00000430003 1440 ntBASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 PSMA6P1-201ENST00000400275 741 ntBASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 OSTCP4-201ENST00000424397 449 ntBASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 BMP6P1-201ENST00000431230 679 ntBASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 OR2L9P-201ENST00000444456 913 ntBASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 CT45A11P-201ENST00000448043 1134 ntBASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 MGAT2P1-201ENST00000449718 797 ntBASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 SNORA81.2-201ENST00000516868 170 ntBASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 COX6B1P4-201ENST00000519826 484 ntBASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 CYCSP25-201ENST00000525280 316 ntBASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 AC008055.1-201ENST00000547032 609 ntBASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 AC010325.3-201ENST00000641084 394 ntBASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 AC112243.1-201ENST00000623949 3851 ntBASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 CDY5P-201ENST00000411487 1580 ntBASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 CDY9P-201ENST00000451397 1580 ntBASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.93□□□□□ -1.46
C9orf40Q8IXQ3 AC006213.6-201ENST00000623722 4179 ntBASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 AC005618.1-201ENST00000606901 3148 ntBASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 CASC19-246ENST00000641625 1606 ntBASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 FAM32BP-201ENST00000344033 333 ntBASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 U3.43-201ENST00000410734 213 ntBASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 EMC3-AS1-205ENST00000438698 534 ntBASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 AC115223.1-201ENST00000466377 870 ntBASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
C9orf40Q8IXQ3 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms