Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AC027559.1-201ENST00000636288 271 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AC009220.2-201ENST00000489759 1751 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AC025809.2-201ENST00000625085 1802 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 FUNDC2P3-201ENST00000334716 533 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 RPS21P8-201ENST00000413365 247 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AC092646.1-201ENST00000427142 901 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 GAPDHP33-201ENST00000443168 1013 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AC073072.2-201ENST00000447425 348 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 MGAT2P1-201ENST00000449718 797 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 OR7L1P-201ENST00000456181 380 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 RN7SL350P-201ENST00000492591 299 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AC091917.2-201ENST00000505002 744 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 SCARNA5-201ENST00000516201 276 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 IGKV2D-38-201ENST00000518423 240 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AC130364.2-201ENST00000528639 604 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 OR52K3P-201ENST00000531655 943 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 RPL29P33-201ENST00000587474 316 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AC241377.1-201ENST00000619797 406 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AC127071.2-201ENST00000623293 527 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AL035425.4-201ENST00000624509 1063 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AC018659.2-201ENST00000624690 715 ntBASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NHLRC1Q6VVB1 AC062022.1-201ENST00000451026 1684 ntBASIC5.9□□□□□ -1.47
NHLRC1Q6VVB1 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
NHLRC1Q6VVB1 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NHLRC1Q6VVB1 PSMC1P4-201ENST00000515236 1327 ntBASIC5.9□□□□□ -1.47
NHLRC1Q6VVB1 TTC41P-205ENST00000551270 3963 ntBASIC5.9□□□□□ -1.47
NHLRC1Q6VVB1 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.9□□□□□ -1.47
NHLRC1Q6VVB1 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.9□□□□□ -1.47
NHLRC1Q6VVB1 MTCO1P22-201ENST00000604619 1360 ntBASIC5.9□□□□□ -1.47
NHLRC1Q6VVB1 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
NHLRC1Q6VVB1 CCAT2-201ENST00000630920 1752 ntBASIC5.9□□□□□ -1.47
NHLRC1Q6VVB1 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NHLRC1Q6VVB1 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
NHLRC1Q6VVB1 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
NHLRC1Q6VVB1 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.9□□□□□ -1.47
NHLRC1Q6VVB1 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 PPIAP24-201ENST00000328558 471 ntBASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 Y_RNA.62-201ENST00000362840 99 ntBASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 RNA5SP140-201ENST00000364524 92 ntBASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 AL049697.3-201ENST00000406493 982 ntBASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 AL359092.1-201ENST00000417156 265 ntBASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 AL139415.1-201ENST00000424862 352 ntBASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 AC083855.1-201ENST00000440041 258 ntBASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 HMGN1P32-201ENST00000441744 256 ntBASIC5.89□□□□□ -1.47
NHLRC1Q6VVB1 SNRPBP1-201ENST00000443634 282 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms