Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC091965.3-201ENST00000506236 208 ntBASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 AC131392.1-201ENST00000506490 633 ntBASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 AC093870.1-201ENST00000506837 213 ntBASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 CASP1P2-201ENST00000526830 1258 ntBASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 AC092718.4-201ENST00000566639 716 ntBASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 AC019257.2-201ENST00000605539 497 ntBASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 AC024255.1-201ENST00000614376 102 ntBASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 AL445649.1-201ENST00000615941 691 ntBASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
ZNF549Q6P9A3 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
ZNF549Q6P9A3 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
ZNF549Q6P9A3 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
ZNF549Q6P9A3 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
ZNF549Q6P9A3 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
ZNF549Q6P9A3 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.4□□□□□ -1.39
ZNF549Q6P9A3 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 AC011815.2-201ENST00000618230 2021 ntBASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 U3.43-201ENST00000410734 213 ntBASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 RNA5SP115-201ENST00000411160 107 ntBASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 AC083862.1-201ENST00000427378 1242 ntBASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 TRIM60P13-201ENST00000432350 1283 ntBASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 AC010086.1-201ENST00000437359 1052 ntBASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 RN7SL790P-201ENST00000474043 298 ntBASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 RPL5P33-201ENST00000487833 905 ntBASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 NPM1P28-201ENST00000492269 840 ntBASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 AC004805.3-201ENST00000603178 310 ntBASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 MIR6883-201ENST00000614952 78 ntBASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 MIR7854-201ENST00000620068 65 ntBASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 AL132640.3-201ENST00000630473 177 ntBASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ZNF549Q6P9A3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 SNORD35A-201ENST00000363389 86 ntBASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 AL391419.1-201ENST00000398901 1275 ntBASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 RN7SKP205-201ENST00000410999 307 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms