Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.21□□□□□ -1.42
SKP1P63208 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.21□□□□□ -1.42
SKP1P63208 WBP1LP11-201ENST00000586141 328 ntBASIC6.21□□□□□ -1.42
SKP1P63208 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.21□□□□□ -1.42
SKP1P63208 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.21□□□□□ -1.42
SKP1P63208 AC097467.4-201ENST00000605504 141 ntBASIC6.21□□□□□ -1.42
SKP1P63208 SNORD96A-201ENST00000606577 79 ntBASIC6.21□□□□□ -1.42
SKP1P63208 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SKP1P63208 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SKP1P63208 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.21□□□□□ -1.42
SKP1P63208 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.21□□□□□ -1.42
SKP1P63208 AL132640.3-201ENST00000630473 177 ntBASIC6.21□□□□□ -1.42
SKP1P63208 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.21□□□□□ -1.42
SKP1P63208 AC099654.15-201ENST00000639802 509 ntBASIC6.21□□□□□ -1.42
SKP1P63208 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SKP1P63208 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SKP1P63208 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SKP1P63208 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SKP1P63208 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
SKP1P63208 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SKP1P63208 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SKP1P63208 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.21□□□□□ -1.42
SKP1P63208 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SKP1P63208 SSXP3-201ENST00000442971 1300 ntBASIC6.21□□□□□ -1.42
SKP1P63208 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SKP1P63208 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SKP1P63208 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SKP1P63208 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SKP1P63208 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SKP1P63208 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
SKP1P63208 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SKP1P63208 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SKP1P63208 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SKP1P63208 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.2□□□□□ -1.42
SKP1P63208 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SKP1P63208 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SKP1P63208 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
SKP1P63208 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SKP1P63208 FANCD2P2-201ENST00000437591 1400 ntBASIC6.2□□□□□ -1.42
SKP1P63208 RNA5SP333-201ENST00000363466 118 ntBASIC6.2□□□□□ -1.42
SKP1P63208 RNA5SP334-201ENST00000364825 118 ntBASIC6.2□□□□□ -1.42
SKP1P63208 AL391419.1-201ENST00000398901 1275 ntBASIC6.2□□□□□ -1.42
SKP1P63208 RPL5P20-201ENST00000403848 896 ntBASIC6.2□□□□□ -1.42
SKP1P63208 RN7SKP221-201ENST00000410420 301 ntBASIC6.2□□□□□ -1.42
SKP1P63208 NME1P1-201ENST00000420914 382 ntBASIC6.2□□□□□ -1.42
SKP1P63208 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.2□□□□□ -1.42
SKP1P63208 AC064862.5-201ENST00000440618 334 ntBASIC6.2□□□□□ -1.42
SKP1P63208 VN1R38P-201ENST00000450265 887 ntBASIC6.2□□□□□ -1.42
SKP1P63208 AC004890.1-201ENST00000461005 181 ntBASIC6.2□□□□□ -1.42
SKP1P63208 RN7SKP64-201ENST00000517206 328 ntBASIC6.2□□□□□ -1.42
SKP1P63208 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.2□□□□□ -1.42
SKP1P63208 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.2□□□□□ -1.42
SKP1P63208 IGHV1-14-201ENST00000523391 241 ntBASIC6.2□□□□□ -1.42
SKP1P63208 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.2□□□□□ -1.42
SKP1P63208 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.2□□□□□ -1.42
SKP1P63208 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.2□□□□□ -1.42
SKP1P63208 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.2□□□□□ -1.42
SKP1P63208 AC025283.1-201ENST00000572039 734 ntBASIC6.2□□□□□ -1.42
SKP1P63208 MIR212-201ENST00000586026 110 ntBASIC6.2□□□□□ -1.42
SKP1P63208 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
SKP1P63208 AC009120.7-201ENST00000623452 780 ntBASIC6.2□□□□□ -1.42
SKP1P63208 AL121936.2-201ENST00000641935 662 ntBASIC6.2□□□□□ -1.42
SKP1P63208 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.2□□□□□ -1.42
SKP1P63208 WBP11P1-201ENST00000562560 1931 ntBASIC6.2□□□□□ -1.42
SKP1P63208 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SKP1P63208 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SKP1P63208 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SKP1P63208 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SKP1P63208 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SKP1P63208 PARP4P1-201ENST00000435945 2337 ntBASIC6.2□□□□□ -1.42
SKP1P63208 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SKP1P63208 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.2□□□□□ -1.42
SKP1P63208 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SKP1P63208 AC009120.2-204ENST00000621548 2032 ntBASIC6.2□□□□□ -1.42
SKP1P63208 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SKP1P63208 AC079248.1-201ENST00000427568 1546 ntBASIC6.2□□□□□ -1.42
SKP1P63208 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SKP1P63208 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SKP1P63208 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.19□□□□□ -1.42
SKP1P63208 AC010624.4-201ENST00000597606 1351 ntBASIC6.19□□□□□ -1.42
SKP1P63208 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.19□□□□□ -1.42
SKP1P63208 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SKP1P63208 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SKP1P63208 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SKP1P63208 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SKP1P63208 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SKP1P63208 RNA5SP485-201ENST00000365053 119 ntBASIC6.19□□□□□ -1.42
SKP1P63208 AL360013.1-201ENST00000419031 858 ntBASIC6.19□□□□□ -1.42
SKP1P63208 CYCSP52-201ENST00000422857 310 ntBASIC6.19□□□□□ -1.42
SKP1P63208 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.19□□□□□ -1.42
SKP1P63208 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.19□□□□□ -1.42
SKP1P63208 AC245291.3-201ENST00000443400 292 ntBASIC6.19□□□□□ -1.42
SKP1P63208 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.19□□□□□ -1.42
SKP1P63208 AL020997.1-201ENST00000446554 349 ntBASIC6.19□□□□□ -1.42
SKP1P63208 H3F3AP3-201ENST00000497682 407 ntBASIC6.19□□□□□ -1.42
SKP1P63208 AC023818.1-201ENST00000498379 384 ntBASIC6.19□□□□□ -1.42
SKP1P63208 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.19□□□□□ -1.42
SKP1P63208 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.19□□□□□ -1.42
SKP1P63208 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.19□□□□□ -1.42
SKP1P63208 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms