Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.66□□□□□ -1.34
CDH6P55285 SNORD35A-201ENST00000363389 86 ntBASIC6.66□□□□□ -1.34
CDH6P55285 RNU1-84P-201ENST00000365447 164 ntBASIC6.66□□□□□ -1.34
CDH6P55285 RN7SKP221-201ENST00000410420 301 ntBASIC6.66□□□□□ -1.34
CDH6P55285 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.66□□□□□ -1.34
CDH6P55285 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.66□□□□□ -1.34
CDH6P55285 AC083862.1-201ENST00000427378 1242 ntBASIC6.66□□□□□ -1.34
CDH6P55285 MED28P4-201ENST00000433137 572 ntBASIC6.66□□□□□ -1.34
CDH6P55285 NPM1P23-201ENST00000440193 849 ntBASIC6.66□□□□□ -1.34
CDH6P55285 OR51A1P-201ENST00000511110 946 ntBASIC6.66□□□□□ -1.34
CDH6P55285 AC106800.3-201ENST00000511389 308 ntBASIC6.66□□□□□ -1.34
CDH6P55285 AC253576.1-201ENST00000511645 1156 ntBASIC6.66□□□□□ -1.34
CDH6P55285 AC093664.1-201ENST00000511779 289 ntBASIC6.66□□□□□ -1.34
CDH6P55285 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.66□□□□□ -1.34
CDH6P55285 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
CDH6P55285 HMGN1P26-201ENST00000558737 303 ntBASIC6.66□□□□□ -1.34
CDH6P55285 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDH6P55285 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.66□□□□□ -1.34
CDH6P55285 MIR6503-201ENST00000622884 86 ntBASIC6.66□□□□□ -1.34
CDH6P55285 AC004836.1-201ENST00000623032 634 ntBASIC6.66□□□□□ -1.34
CDH6P55285 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CDH6P55285 LINC02495-203ENST00000636704 242 ntBASIC6.66□□□□□ -1.34
CDH6P55285 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.66□□□□□ -1.34
CDH6P55285 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CDH6P55285 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.66□□□□□ -1.34
CDH6P55285 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDH6P55285 AL353743.3-201ENST00000442109 1468 ntBASIC6.66□□□□□ -1.34
CDH6P55285 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDH6P55285 AC011815.2-201ENST00000618230 2021 ntBASIC6.66□□□□□ -1.34
CDH6P55285 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.34
CDH6P55285 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.34
CDH6P55285 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.65□□□□□ -1.34
CDH6P55285 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.65□□□□□ -1.34
CDH6P55285 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.65□□□□□ -1.34
CDH6P55285 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.65□□□□□ -1.34
CDH6P55285 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CDH6P55285 AC006511.3-201ENST00000624929 1783 ntBASIC6.65□□□□□ -1.34
CDH6P55285 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
CDH6P55285 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.65□□□□□ -1.34
CDH6P55285 RNA5SP478-201ENST00000364657 115 ntBASIC6.65□□□□□ -1.34
CDH6P55285 AL033519.1-201ENST00000407266 307 ntBASIC6.65□□□□□ -1.34
CDH6P55285 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.65□□□□□ -1.34
CDH6P55285 MRPS21P5-201ENST00000417885 231 ntBASIC6.65□□□□□ -1.34
CDH6P55285 AL157884.1-201ENST00000424561 454 ntBASIC6.65□□□□□ -1.34
CDH6P55285 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.65□□□□□ -1.34
CDH6P55285 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.65□□□□□ -1.34
CDH6P55285 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.65□□□□□ -1.34
CDH6P55285 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.65□□□□□ -1.34
CDH6P55285 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CDH6P55285 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.65□□□□□ -1.34
CDH6P55285 GAPDHP37-201ENST00000442317 968 ntBASIC6.65□□□□□ -1.34
CDH6P55285 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CDH6P55285 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.65□□□□□ -1.34
CDH6P55285 RN7SL413P-201ENST00000482700 297 ntBASIC6.65□□□□□ -1.34
CDH6P55285 RPL17P2-201ENST00000491913 451 ntBASIC6.65□□□□□ -1.34
CDH6P55285 COX6B1P4-201ENST00000519826 484 ntBASIC6.65□□□□□ -1.34
CDH6P55285 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.65□□□□□ -1.34
CDH6P55285 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CDH6P55285 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.65□□□□□ -1.34
CDH6P55285 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.65□□□□□ -1.34
CDH6P55285 RPL3P13-201ENST00000550415 216 ntBASIC6.65□□□□□ -1.34
CDH6P55285 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.65□□□□□ -1.34
CDH6P55285 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CDH6P55285 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.65□□□□□ -1.34
CDH6P55285 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.65□□□□□ -1.34
CDH6P55285 AC068213.1-201ENST00000625124 226 ntBASIC6.65□□□□□ -1.34
CDH6P55285 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.65□□□□□ -1.35
CDH6P55285 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
CDH6P55285 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.65□□□□□ -1.35
CDH6P55285 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.65□□□□□ -1.35
CDH6P55285 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
CDH6P55285 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.65□□□□□ -1.35
CDH6P55285 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.64□□□□□ -1.35
CDH6P55285 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
CDH6P55285 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDH6P55285 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CDH6P55285 AP003170.5-201ENST00000397185 335 ntBASIC6.64□□□□□ -1.35
CDH6P55285 RNA5SP115-201ENST00000411160 107 ntBASIC6.64□□□□□ -1.35
CDH6P55285 AL139184.1-202ENST00000422303 222 ntBASIC6.64□□□□□ -1.35
CDH6P55285 AC007568.1-201ENST00000422912 471 ntBASIC6.64□□□□□ -1.35
CDH6P55285 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDH6P55285 AL645939.3-201ENST00000435408 225 ntBASIC6.64□□□□□ -1.35
CDH6P55285 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.64□□□□□ -1.35
CDH6P55285 RN7SL393P-201ENST00000463588 296 ntBASIC6.64□□□□□ -1.35
CDH6P55285 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.64□□□□□ -1.35
CDH6P55285 AC018645.1-201ENST00000505003 109 ntBASIC6.64□□□□□ -1.35
CDH6P55285 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.64□□□□□ -1.35
CDH6P55285 AC113191.1-201ENST00000517759 403 ntBASIC6.64□□□□□ -1.35
CDH6P55285 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.64□□□□□ -1.35
CDH6P55285 AL133399.1-201ENST00000527476 298 ntBASIC6.64□□□□□ -1.35
CDH6P55285 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.64□□□□□ -1.35
CDH6P55285 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.64□□□□□ -1.35
CDH6P55285 AC023968.1-201ENST00000560719 475 ntBASIC6.64□□□□□ -1.35
CDH6P55285 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDH6P55285 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.64□□□□□ -1.35
CDH6P55285 AC024267.2-201ENST00000582737 417 ntBASIC6.64□□□□□ -1.35
CDH6P55285 MIR5010-201ENST00000582846 120 ntBASIC6.64□□□□□ -1.35
CDH6P55285 AC073046.2-201ENST00000604756 527 ntBASIC6.64□□□□□ -1.35
CDH6P55285 AL390877.1-201ENST00000605704 214 ntBASIC6.64□□□□□ -1.35
CDH6P55285 AL008723.3-201ENST00000608926 449 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms