Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 RPS3AP41-201ENST00000462701 778 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 AC092324.1-201ENST00000468671 324 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 RN7SL561P-201ENST00000488553 281 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 TMEM108-211ENST00000515826 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCA2P51587 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BRCA2P51587 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC6.64□□□□□ -1.35
BRCA2P51587 TXNP4-201ENST00000575018 310 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
BRCA2P51587 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCA2P51587 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
BRCA2P51587 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCA2P51587 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.64□□□□□ -1.35
BRCA2P51587 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCA2P51587 AC104964.3-201ENST00000606115 2860 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 EFR3B-204ENST00000403714 7434 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
BRCA2P51587 ZNF442-201ENST00000242804 6219 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
BRCA2P51587 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCA2P51587 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC6.64□□□□□ -1.35
BRCA2P51587 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCA2P51587 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC6.64□□□□□ -1.35
BRCA2P51587 AL360271.1-201ENST00000395679 510 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 AC096537.2-201ENST00000413707 714 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.64□□□□□ -1.35
BRCA2P51587 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.64□□□□□ -1.35
BRCA2P51587 AC117395.1-201ENST00000487390 403 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.64□□□□□ -1.35
BRCA2P51587 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
BRCA2P51587 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.64□□□□□ -1.35
BRCA2P51587 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCA2P51587 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
BRCA2P51587 ACTR3C-206ENST00000613959 5142 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC6.64□□□□□ -1.35
BRCA2P51587 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCA2P51587 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC6.64□□□□□ -1.35
BRCA2P51587 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCA2P51587 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCA2P51587 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.64□□□□□ -1.35
BRCA2P51587 AL389915.2-201ENST00000454576 441 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 RPS3AP15-201ENST00000483874 781 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.64□□□□□ -1.35
BRCA2P51587 AL953862.2-201ENST00000603089 820 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 AC104785.1-201ENST00000603220 588 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.64□□□□□ -1.35
BRCA2P51587 AC087565.3-203ENST00000641018 837 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 AC110048.2-201ENST00000617013 6721 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 AC110373.1-201ENST00000505994 3505 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.63□□□□□ -1.35
BRCA2P51587 AC112243.1-201ENST00000623949 3851 ntBASIC6.63□□□□□ -1.35
BRCA2P51587 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.63□□□□□ -1.35
BRCA2P51587 RBMY2QP-201ENST00000429799 1147 ntBASIC6.63□□□□□ -1.35
BRCA2P51587 ANKRD54P1-201ENST00000433115 471 ntBASIC6.63□□□□□ -1.35
BRCA2P51587 RPS11P7-201ENST00000442125 465 ntBASIC6.63□□□□□ -1.35
BRCA2P51587 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.63□□□□□ -1.35
BRCA2P51587 RPA2P3-201ENST00000533268 770 ntBASIC6.63□□□□□ -1.35
BRCA2P51587 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.63□□□□□ -1.35
BRCA2P51587 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.63□□□□□ -1.35
BRCA2P51587 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.63□□□□□ -1.35
BRCA2P51587 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.63□□□□□ -1.35
BRCA2P51587 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
BRCA2P51587 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
BRCA2P51587 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
BRCA2P51587 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.63□□□□□ -1.35
BRCA2P51587 LAMA1-201ENST00000389658 9657 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
BRCA2P51587 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.63□□□□□ -1.35
BRCA2P51587 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
BRCA2P51587 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
BRCA2P51587 RN7SKP213-201ENST00000410746 298 ntBASIC6.63□□□□□ -1.35
BRCA2P51587 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
BRCA2P51587 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.63□□□□□ -1.35
BRCA2P51587 OR52B5P-201ENST00000435337 951 ntBASIC6.63□□□□□ -1.35
BRCA2P51587 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.63□□□□□ -1.35
BRCA2P51587 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.63□□□□□ -1.35
BRCA2P51587 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.63□□□□□ -1.35
BRCA2P51587 AC022215.1-201ENST00000481770 362 ntBASIC6.63□□□□□ -1.35
BRCA2P51587 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.63□□□□□ -1.35
BRCA2P51587 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.63□□□□□ -1.35
BRCA2P51587 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
BRCA2P51587 OR52B5P-202ENST00000641118 1110 ntBASIC6.63□□□□□ -1.35
BRCA2P51587 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
BRCA2P51587 AL121768.1-201ENST00000613917 2544 ntBASIC6.63□□□□□ -1.35
BRCA2P51587 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
BRCA2P51587 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
BRCA2P51587 AC007485.2-201ENST00000623493 1667 ntBASIC6.63□□□□□ -1.35
BRCA2P51587 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
BRCA2P51587 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
BRCA2P51587 NEK2P4-201ENST00000425793 1329 ntBASIC6.63□□□□□ -1.35
BRCA2P51587 AL512310.3-201ENST00000547023 1335 ntBASIC6.63□□□□□ -1.35
BRCA2P51587 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
BRCA2P51587 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
BRCA2P51587 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
BRCA2P51587 RNA5SP87-201ENST00000384155 118 ntBASIC6.63□□□□□ -1.35
BRCA2P51587 PSMC1P2-201ENST00000423961 1204 ntBASIC6.63□□□□□ -1.35
BRCA2P51587 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.63□□□□□ -1.35
BRCA2P51587 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.63□□□□□ -1.35
BRCA2P51587 AC020898.1-201ENST00000474167 787 ntBASIC6.63□□□□□ -1.35
BRCA2P51587 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.63□□□□□ -1.35
BRCA2P51587 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.63□□□□□ -1.35
BRCA2P51587 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.63□□□□□ -1.35
BRCA2P51587 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms