Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 RN7SL643P-201ENST00000471845 291 ntBASIC7.28□□□□□ -1.24
CIITAP33076 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.28□□□□□ -1.24
CIITAP33076 GM2AP2-201ENST00000491764 562 ntBASIC7.28□□□□□ -1.24
CIITAP33076 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.28□□□□□ -1.24
CIITAP33076 AC091965.3-201ENST00000506236 208 ntBASIC7.28□□□□□ -1.24
CIITAP33076 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC7.28□□□□□ -1.24
CIITAP33076 MTCO3P42-201ENST00000509488 518 ntBASIC7.28□□□□□ -1.24
CIITAP33076 MTCO3P39-201ENST00000514812 518 ntBASIC7.28□□□□□ -1.24
CIITAP33076 AC073581.1-201ENST00000519036 575 ntBASIC7.28□□□□□ -1.24
CIITAP33076 IGHV4-55-201ENST00000520889 368 ntBASIC7.28□□□□□ -1.24
CIITAP33076 OR7E158P-201ENST00000524483 910 ntBASIC7.28□□□□□ -1.24
CIITAP33076 OR4A41P-201ENST00000533053 928 ntBASIC7.28□□□□□ -1.24
CIITAP33076 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.28□□□□□ -1.24
CIITAP33076 AL121579.2-201ENST00000555466 590 ntBASIC7.28□□□□□ -1.24
CIITAP33076 AC121758.1-202ENST00000556917 658 ntBASIC7.28□□□□□ -1.24
CIITAP33076 AC244034.2-201ENST00000562504 509 ntBASIC7.28□□□□□ -1.24
CIITAP33076 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.28□□□□□ -1.24
CIITAP33076 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.28□□□□□ -1.24
CIITAP33076 AL122023.1-201ENST00000622847 530 ntBASIC7.28□□□□□ -1.24
CIITAP33076 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.28□□□□□ -1.24
CIITAP33076 TEX41-271ENST00000628213 993 ntTSL 5 BASIC7.28□□□□□ -1.24
CIITAP33076 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.28□□□□□ -1.24
CIITAP33076 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CIITAP33076 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CIITAP33076 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.28□□□□□ -1.24
CIITAP33076 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
CIITAP33076 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
CIITAP33076 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CIITAP33076 PARP4P1-201ENST00000435945 2337 ntBASIC7.28□□□□□ -1.24
CIITAP33076 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CIITAP33076 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CIITAP33076 AC125238.2-201ENST00000430003 1440 ntBASIC7.27□□□□□ -1.24
CIITAP33076 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CIITAP33076 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.27□□□□□ -1.25
CIITAP33076 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.27□□□□□ -1.25
CIITAP33076 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
CIITAP33076 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
CIITAP33076 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CIITAP33076 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CIITAP33076 RNA5SP350-201ENST00000363298 111 ntBASIC7.27□□□□□ -1.25
CIITAP33076 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CIITAP33076 PSMA6P1-201ENST00000400275 741 ntBASIC7.27□□□□□ -1.25
CIITAP33076 AL157884.1-201ENST00000424561 454 ntBASIC7.27□□□□□ -1.25
CIITAP33076 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.27□□□□□ -1.25
CIITAP33076 GTF2IP14-201ENST00000441415 586 ntBASIC7.27□□□□□ -1.25
CIITAP33076 MGAT2P1-201ENST00000449718 797 ntBASIC7.27□□□□□ -1.25
CIITAP33076 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.27□□□□□ -1.25
CIITAP33076 H3F3AP5-201ENST00000475267 429 ntBASIC7.27□□□□□ -1.25
CIITAP33076 AC007688.1-201ENST00000475592 759 ntBASIC7.27□□□□□ -1.25
CIITAP33076 RPL12P31-201ENST00000478433 450 ntBASIC7.27□□□□□ -1.25
CIITAP33076 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CIITAP33076 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.27□□□□□ -1.25
CIITAP33076 IGKV1D-22-201ENST00000518953 324 ntBASIC7.27□□□□□ -1.25
CIITAP33076 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.27□□□□□ -1.25
CIITAP33076 CYCSP25-201ENST00000525280 316 ntBASIC7.27□□□□□ -1.25
CIITAP33076 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CIITAP33076 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.27□□□□□ -1.25
CIITAP33076 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.27□□□□□ -1.25
CIITAP33076 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CIITAP33076 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.27□□□□□ -1.25
CIITAP33076 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.27□□□□□ -1.25
CIITAP33076 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.27□□□□□ -1.25
CIITAP33076 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.27□□□□□ -1.25
CIITAP33076 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.27□□□□□ -1.25
CIITAP33076 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.27□□□□□ -1.25
CIITAP33076 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.27□□□□□ -1.25
CIITAP33076 AL359091.2-201ENST00000609303 556 ntBASIC7.27□□□□□ -1.25
CIITAP33076 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.27□□□□□ -1.25
CIITAP33076 uc_338.29-201ENST00000615099 168 ntBASIC7.27□□□□□ -1.25
CIITAP33076 AC002044.3-201ENST00000623314 541 ntBASIC7.27□□□□□ -1.25
CIITAP33076 AC012254.5-201ENST00000623573 478 ntBASIC7.27□□□□□ -1.25
CIITAP33076 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.27□□□□□ -1.25
CIITAP33076 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.27□□□□□ -1.25
CIITAP33076 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CIITAP33076 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.27□□□□□ -1.25
CIITAP33076 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CIITAP33076 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.27□□□□□ -1.25
CIITAP33076 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.27□□□□□ -1.25
CIITAP33076 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.27□□□□□ -1.25
CIITAP33076 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.27□□□□□ -1.25
CIITAP33076 AL731556.1-201ENST00000394628 3711 ntBASIC7.27□□□□□ -1.25
CIITAP33076 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.27□□□□□ -1.25
CIITAP33076 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CIITAP33076 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
CIITAP33076 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CIITAP33076 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CIITAP33076 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.26□□□□□ -1.25
CIITAP33076 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.26□□□□□ -1.25
CIITAP33076 AC110373.1-201ENST00000505994 3505 ntBASIC7.26□□□□□ -1.25
CIITAP33076 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.26□□□□□ -1.25
CIITAP33076 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CIITAP33076 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CIITAP33076 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CIITAP33076 RPSAP32-201ENST00000432681 526 ntBASIC7.26□□□□□ -1.25
CIITAP33076 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.26□□□□□ -1.25
CIITAP33076 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.26□□□□□ -1.25
CIITAP33076 CCNJP2-201ENST00000457810 1163 ntBASIC7.26□□□□□ -1.25
CIITAP33076 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC7.26□□□□□ -1.25
CIITAP33076 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.26□□□□□ -1.25
CIITAP33076 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms