Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CNGA1P29973 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.79□□□□□ -1.16
CNGA1P29973 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CNGA1P29973 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
CNGA1P29973 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CNGA1P29973 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.79□□□□□ -1.16
CNGA1P29973 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
CNGA1P29973 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
CNGA1P29973 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.79□□□□□ -1.16
CNGA1P29973 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.79□□□□□ -1.16
CNGA1P29973 RN7SKP237-201ENST00000364663 301 ntBASIC7.79□□□□□ -1.16
CNGA1P29973 RN7SKP15-201ENST00000364742 309 ntBASIC7.79□□□□□ -1.16
CNGA1P29973 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
CNGA1P29973 CCNB2P1-201ENST00000399411 1150 ntBASIC7.79□□□□□ -1.16
CNGA1P29973 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.79□□□□□ -1.16
CNGA1P29973 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC7.79□□□□□ -1.16
CNGA1P29973 ARAFP1-201ENST00000422172 605 ntBASIC7.79□□□□□ -1.16
CNGA1P29973 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.79□□□□□ -1.16
CNGA1P29973 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CNGA1P29973 RAB9AP5-201ENST00000437794 597 ntBASIC7.79□□□□□ -1.16
CNGA1P29973 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.79□□□□□ -1.16
CNGA1P29973 RAB9AP2-201ENST00000443911 597 ntBASIC7.79□□□□□ -1.16
CNGA1P29973 GAPDHP20-201ENST00000444107 1007 ntBASIC7.79□□□□□ -1.16
CNGA1P29973 OR51P1P-201ENST00000447547 942 ntBASIC7.79□□□□□ -1.16
CNGA1P29973 VN1R48P-201ENST00000448149 1036 ntBASIC7.79□□□□□ -1.16
CNGA1P29973 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CNGA1P29973 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC7.79□□□□□ -1.16
CNGA1P29973 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC7.79□□□□□ -1.16
CNGA1P29973 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.79□□□□□ -1.16
CNGA1P29973 RN7SL413P-201ENST00000482700 297 ntBASIC7.79□□□□□ -1.16
CNGA1P29973 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CNGA1P29973 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CNGA1P29973 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.79□□□□□ -1.16
CNGA1P29973 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.79□□□□□ -1.16
CNGA1P29973 DPPA3P2-201ENST00000553589 478 ntBASIC7.79□□□□□ -1.16
CNGA1P29973 AC005519.1-201ENST00000554490 601 ntBASIC7.79□□□□□ -1.16
CNGA1P29973 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.79□□□□□ -1.16
CNGA1P29973 AC063977.7-201ENST00000594454 337 ntBASIC7.79□□□□□ -1.16
CNGA1P29973 AC015982.1-201ENST00000608113 465 ntBASIC7.79□□□□□ -1.16
CNGA1P29973 RN7SL261P-201ENST00000613441 282 ntBASIC7.79□□□□□ -1.16
CNGA1P29973 MIR6721-201ENST00000617181 87 ntBASIC7.79□□□□□ -1.16
CNGA1P29973 LINC00216-201ENST00000623548 1126 ntBASIC7.79□□□□□ -1.16
CNGA1P29973 AP001962.1-201ENST00000624114 559 ntBASIC7.79□□□□□ -1.16
CNGA1P29973 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC7.79□□□□□ -1.16
CNGA1P29973 AC111152.1-202ENST00000635848 339 ntBASIC7.79□□□□□ -1.16
CNGA1P29973 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.79□□□□□ -1.16
CNGA1P29973 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.79□□□□□ -1.16
CNGA1P29973 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.79□□□□□ -1.16
CNGA1P29973 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.79□□□□□ -1.16
CNGA1P29973 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CNGA1P29973 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
CNGA1P29973 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.79□□□□□ -1.16
CNGA1P29973 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
CNGA1P29973 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CNGA1P29973 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CNGA1P29973 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CNGA1P29973 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.79□□□□□ -1.16
CNGA1P29973 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CNGA1P29973 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CNGA1P29973 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.79□□□□□ -1.16
CNGA1P29973 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CNGA1P29973 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CNGA1P29973 AL031651.1-201ENST00000615357 1438 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.78□□□□□ -1.16
CNGA1P29973 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.78□□□□□ -1.16
CNGA1P29973 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CNGA1P29973 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
CNGA1P29973 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CNGA1P29973 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CNGA1P29973 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CNGA1P29973 RNA5SP140-201ENST00000364524 92 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 RNU1-55P-201ENST00000365510 158 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CNGA1P29973 AC006511.2-201ENST00000388966 660 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CNGA1P29973 RN7SKP129-201ENST00000410288 299 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC7.78□□□□□ -1.16
CNGA1P29973 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.78□□□□□ -1.16
CNGA1P29973 PSMD10P2-201ENST00000432890 672 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC7.78□□□□□ -1.16
CNGA1P29973 AL645939.3-201ENST00000435408 225 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 GAPDHP16-201ENST00000448152 962 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.78□□□□□ -1.16
CNGA1P29973 MTND2P25-201ENST00000449028 610 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 PRDX1P1-201ENST00000449329 596 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.78□□□□□ -1.16
CNGA1P29973 AP005202.1-201ENST00000489915 867 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.78□□□□□ -1.16
CNGA1P29973 AC025768.1-201ENST00000510057 267 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC7.78□□□□□ -1.16
CNGA1P29973 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CNGA1P29973 SEC11B-201ENST00000518383 499 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CNGA1P29973 AC084121.1-201ENST00000533882 835 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.78□□□□□ -1.16
CNGA1P29973 AC074029.2-201ENST00000551045 634 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC7.78□□□□□ -1.16
CNGA1P29973 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC7.78□□□□□ -1.16
CNGA1P29973 OR1E3-201ENST00000575608 948 ntBASIC7.78□□□□□ -1.16
CNGA1P29973 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms