Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 PHB2P1-201ENST00000434943 890 ntBASIC8.56□□□□□ -1.04
HLA-CQ95604 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC8.56□□□□□ -1.04
HLA-CQ95604 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC8.56□□□□□ -1.04
HLA-CQ95604 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC8.56□□□□□ -1.04
HLA-CQ95604 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC8.56□□□□□ -1.04
HLA-CQ95604 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC8.56□□□□□ -1.04
HLA-CQ95604 HMGB1P16-201ENST00000447155 540 ntBASIC8.56□□□□□ -1.04
HLA-CQ95604 RPS18P13-201ENST00000461260 454 ntBASIC8.56□□□□□ -1.04
HLA-CQ95604 AC107398.1-201ENST00000486904 505 ntBASIC8.56□□□□□ -1.04
HLA-CQ95604 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC8.56□□□□□ -1.04
HLA-CQ95604 HMGN1P12-201ENST00000499125 195 ntBASIC8.56□□□□□ -1.04
HLA-CQ95604 AC108120.2-201ENST00000512973 294 ntBASIC8.56□□□□□ -1.04
HLA-CQ95604 KRT18P54-201ENST00000513396 748 ntBASIC8.56□□□□□ -1.04
HLA-CQ95604 RNA5SP101-201ENST00000517036 108 ntBASIC8.56□□□□□ -1.04
HLA-CQ95604 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC8.56□□□□□ -1.04
HLA-CQ95604 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC8.56□□□□□ -1.04
HLA-CQ95604 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC8.56□□□□□ -1.04
HLA-CQ95604 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC8.56□□□□□ -1.04
HLA-CQ95604 NQO1-205ENST00000561500 891 ntTSL 3 BASIC8.56□□□□□ -1.04
HLA-CQ95604 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC8.56□□□□□ -1.04
HLA-CQ95604 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC8.56□□□□□ -1.04
HLA-CQ95604 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC8.56□□□□□ -1.04
HLA-CQ95604 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC8.56□□□□□ -1.04
HLA-CQ95604 MIR5192-201ENST00000579892 92 ntBASIC8.56□□□□□ -1.04
HLA-CQ95604 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC8.56□□□□□ -1.04
HLA-CQ95604 AC008385.1-201ENST00000604421 355 ntBASIC8.56□□□□□ -1.04
HLA-CQ95604 AC008277.2-201ENST00000605196 797 ntBASIC8.56□□□□□ -1.04
HLA-CQ95604 SEM1-224ENST00000623693 729 ntTSL 5 BASIC8.56□□□□□ -1.04
HLA-CQ95604 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC8.56□□□□□ -1.04
HLA-CQ95604 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC8.56□□□□□ -1.04
HLA-CQ95604 OR52B5P-202ENST00000641118 1110 ntBASIC8.56□□□□□ -1.04
HLA-CQ95604 AC060780.1-203ENST00000634503 2406 ntTSL 3 BASIC8.56□□□□□ -1.04
HLA-CQ95604 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HLA-CQ95604 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HLA-CQ95604 POLR2D-201ENST00000272645 5042 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HLA-CQ95604 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HLA-CQ95604 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC8.56□□□□□ -1.04
HLA-CQ95604 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
HLA-CQ95604 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HLA-CQ95604 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
HLA-CQ95604 ANKRD55-203ENST00000504958 2139 ntTSL 5 BASIC8.56□□□□□ -1.04
HLA-CQ95604 ZNF551-201ENST00000282296 4564 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HLA-CQ95604 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC8.55□□□□□ -1.04
HLA-CQ95604 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-CQ95604 TDRD3-202ENST00000377881 2532 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-CQ95604 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-CQ95604 EIF5A2-201ENST00000295822 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-CQ95604 SEC31A-227ENST00000508502 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-CQ95604 CACNB4-231ENST00000636721 1542 ntTSL 5 BASIC8.55□□□□□ -1.04
HLA-CQ95604 SNX20-203ENST00000423026 2156 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-CQ95604 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC8.55□□□□□ -1.04
HLA-CQ95604 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-CQ95604 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC8.55□□□□□ -1.04
HLA-CQ95604 PRDM9-201ENST00000296682 3691 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-CQ95604 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
HLA-CQ95604 AC009163.7-201ENST00000621929 2557 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-CQ95604 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-CQ95604 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-CQ95604 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
HLA-CQ95604 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-CQ95604 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
HLA-CQ95604 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
HLA-CQ95604 AL139100.1-201ENST00000408001 498 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
HLA-CQ95604 LINCMD1-201ENST00000418518 462 ntTSL 5 BASIC8.55□□□□□ -1.04
HLA-CQ95604 TIMM8AP1-201ENST00000419283 295 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 PTP4A1P1-201ENST00000420539 515 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 VN1R20P-201ENST00000425215 966 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC8.55□□□□□ -1.04
HLA-CQ95604 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC8.55□□□□□ -1.04
HLA-CQ95604 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC8.55□□□□□ -1.04
HLA-CQ95604 AC010240.2-201ENST00000445363 1205 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 SLAMF6P1-201ENST00000451067 602 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 RPS4XP12-201ENST00000461747 709 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 AC004801.2-201ENST00000468202 779 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 RPS7P6-201ENST00000485777 579 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 ABCA11P-202ENST00000504019 2110 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC8.55□□□□□ -1.04
HLA-CQ95604 RNF185-AS1-201ENST00000526089 353 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-CQ95604 CR383656.6-201ENST00000550518 394 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 AC125611.2-201ENST00000551907 647 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC8.55□□□□□ -1.04
HLA-CQ95604 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC8.55□□□□□ -1.04
HLA-CQ95604 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC8.55□□□□□ -1.04
HLA-CQ95604 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC8.55□□□□□ -1.04
HLA-CQ95604 AC011193.2-201ENST00000582638 367 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 AC063977.5-201ENST00000601044 974 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 AL020991.1-201ENST00000612314 373 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 MIR8082-201ENST00000612488 81 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 AL121890.2-201ENST00000617644 465 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
HLA-CQ95604 MIR6813-201ENST00000621638 56 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC8.55□□□□□ -1.04
HLA-CQ95604 AKNAD1-201ENST00000369994 2318 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
HLA-CQ95604 COL21A1-201ENST00000244728 4339 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-CQ95604 UVSSA-201ENST00000324803 4441 ntBASIC8.55□□□□□ -1.04
HLA-CQ95604 C11orf57-202ENST00000393047 3669 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms