Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC2□□□□□ -2.09
SYNE1Q8NF91 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC2□□□□□ -2.09
SYNE1Q8NF91 MIR212-201ENST00000586026 110 ntBASIC2□□□□□ -2.09
SYNE1Q8NF91 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC2□□□□□ -2.09
SYNE1Q8NF91 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC2□□□□□ -2.09
SYNE1Q8NF91 AC008691.1-209ENST00000642094 814 ntBASIC2□□□□□ -2.09
SYNE1Q8NF91 AC009831.5-201ENST00000624000 3189 ntBASIC2□□□□□ -2.09
SYNE1Q8NF91 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC2□□□□□ -2.09
SYNE1Q8NF91 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SYNE1Q8NF91 ENO1P4-201ENST00000416471 1785 ntBASIC2□□□□□ -2.09
SYNE1Q8NF91 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SYNE1Q8NF91 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC2□□□□□ -2.09
SYNE1Q8NF91 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
SYNE1Q8NF91 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC2□□□□□ -2.09
SYNE1Q8NF91 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SYNE1Q8NF91 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
SYNE1Q8NF91 AL353743.3-201ENST00000442109 1468 ntBASIC2□□□□□ -2.09
SYNE1Q8NF91 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC2□□□□□ -2.09
SYNE1Q8NF91 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC2□□□□□ -2.09
SYNE1Q8NF91 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC2□□□□□ -2.09
SYNE1Q8NF91 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SYNE1Q8NF91 RPS7P14-201ENST00000426405 583 ntBASIC2□□□□□ -2.09
SYNE1Q8NF91 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC2□□□□□ -2.09
SYNE1Q8NF91 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC2□□□□□ -2.09
SYNE1Q8NF91 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC2□□□□□ -2.09
SYNE1Q8NF91 AC090115.2-201ENST00000548060 883 ntBASIC2□□□□□ -2.09
SYNE1Q8NF91 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC2□□□□□ -2.09
SYNE1Q8NF91 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC2□□□□□ -2.09
SYNE1Q8NF91 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
SYNE1Q8NF91 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC2□□□□□ -2.09
SYNE1Q8NF91 SNORD96A-201ENST00000606577 79 ntBASIC2□□□□□ -2.09
SYNE1Q8NF91 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC2□□□□□ -2.09
SYNE1Q8NF91 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC2□□□□□ -2.09
SYNE1Q8NF91 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
SYNE1Q8NF91 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC2□□□□□ -2.09
SYNE1Q8NF91 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SYNE1Q8NF91 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC2□□□□□ -2.09
SYNE1Q8NF91 VN2R1P-201ENST00000449668 1743 ntBASIC2□□□□□ -2.09
SYNE1Q8NF91 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
SYNE1Q8NF91 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC2□□□□□ -2.09
SYNE1Q8NF91 AC104843.2-201ENST00000427666 297 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC135721.2-201ENST00000464237 300 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 UCK2-205ENST00000469256 753 ntTSL 3 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 FXNP1-201ENST00000555153 337 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC026458.1-201ENST00000564330 438 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 RN7SL475P-201ENST00000583379 298 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AL589765.6-201ENST00000601909 549 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AL591167.1-201ENST00000607321 456 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 MTCO1P11-201ENST00000429111 1528 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 RPL7P51-201ENST00000490532 749 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 IGKV3D-25-201ENST00000519599 235 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 SMARCE1P3-201ENST00000553649 1231 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AL589863.1-201ENST00000595383 631 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 CYP2G2P-201ENST00000594920 1485 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 LINC01613-201ENST00000561476 2780 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 RN7SKP278-201ENST00000410504 342 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 RN7SKP271-201ENST00000410528 320 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 MYL6P3-201ENST00000436904 432 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 SDHCP3-201ENST00000445371 506 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 CEACAMP5-201ENST00000448037 961 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 HMGB1P7-201ENST00000450921 612 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 RN7SL569P-201ENST00000494652 288 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC117500.1-201ENST00000497352 755 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AL136097.3-201ENST00000611097 505 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 244.5 ms