Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AC022819.1-201ENST00000563495 3910 ntBASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 RPL24P4-201ENST00000326586 421 ntBASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 MIR365B-201ENST00000362317 111 ntBASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 UBBP5-201ENST00000446970 266 ntBASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 GAPDHP16-201ENST00000448152 962 ntBASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 MTND2P3-201ENST00000452458 470 ntBASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AC117395.1-201ENST00000487390 403 ntBASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 SNRPCP11-201ENST00000492453 205 ntBASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AP002981.1-201ENST00000517692 975 ntBASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 ARGFXP2-201ENST00000579304 949 ntBASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AC011921.2-201ENST00000589465 152 ntBASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 RAB28P4-201ENST00000622233 665 ntBASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AP000577.1-201ENST00000624366 878 ntBASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AL354702.2-202ENST00000641481 890 ntBASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 RBPJP6-201ENST00000411556 1431 ntBASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 AC087565.3-202ENST00000642085 1603 ntBASIC6.58□□□□□ -1.36
LRRTM4Q86VH4 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 PSMC1P4-201ENST00000515236 1327 ntBASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 RNA5SP140-201ENST00000364524 92 ntBASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 AL353625.1-202ENST00000366273 571 ntBASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 AC096537.2-201ENST00000413707 714 ntBASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 AL512504.1-201ENST00000415494 778 ntBASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 AC064862.5-201ENST00000440618 334 ntBASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 RN7SL393P-201ENST00000463588 296 ntBASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 OR52H2P-201ENST00000514607 902 ntBASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 SEC11B-201ENST00000518383 499 ntBASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 AP003168.1-201ENST00000530091 307 ntBASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 OR9G2P-201ENST00000533326 880 ntBASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 RPL29P33-201ENST00000587474 316 ntBASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 AC008833.1-201ENST00000611633 691 ntBASIC6.57□□□□□ -1.36
LRRTM4Q86VH4 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms