Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 DNAJC19P5-201ENST00000443295 316 ntBASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 RN7SL515P-201ENST00000463999 297 ntBASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 CLUHP1-201ENST00000435012 1190 ntBASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 SNORA70.20-201ENST00000516848 126 ntBASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 AC015802.2-201ENST00000589690 189 ntBASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 SNORD91A-202ENST00000609620 191 ntBASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 MIR6719-201ENST00000622428 87 ntBASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 AC106872.5-201ENST00000508856 1416 ntBASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42BPAQ5VT25 RPS2P45-201ENST00000469997 2057 ntBASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 FUNDC2P3-201ENST00000334716 533 ntBASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 NMD3P2-201ENST00000421815 761 ntBASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 AL035660.1-201ENST00000422041 222 ntBASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 RN7SL269P-201ENST00000467795 305 ntBASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 RN7SL799P-201ENST00000475891 298 ntBASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 AC096861.1-201ENST00000616652 240 ntBASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 AL132640.3-201ENST00000630473 177 ntBASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 AL049767.1-202ENST00000637826 242 ntBASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 AL591848.4-201ENST00000567832 3472 ntBASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 EEF1A1P24-201ENST00000451469 1378 ntBASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 AC025809.2-201ENST00000625085 1802 ntBASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 AC027088.4-201ENST00000611559 1947 ntBASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 OR7E101P-201ENST00000400428 513 ntBASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 MIR1178-201ENST00000408396 91 ntBASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 BRWD1P3-201ENST00000428816 390 ntBASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 COPS8P2-201ENST00000473228 627 ntBASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 UBA52P7-201ENST00000486088 380 ntBASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC9.36□□□□□ -0.91
CDC42BPAQ5VT25 MRO-208ENST00000588444 866 ntTSL 3 BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms