Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 OR7E101P-201ENST00000400428 513 ntBASIC6.26□□□□□ -1.41
RIF1Q5UIP0 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 RPL23AP85-201ENST00000421838 433 ntBASIC6.26□□□□□ -1.41
RIF1Q5UIP0 HMGN1P6-201ENST00000438508 291 ntBASIC6.26□□□□□ -1.41
RIF1Q5UIP0 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 AC090142.2-201ENST00000483263 416 ntBASIC6.26□□□□□ -1.41
RIF1Q5UIP0 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 AC021220.1-201ENST00000507445 630 ntBASIC6.26□□□□□ -1.41
RIF1Q5UIP0 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 CYCSP22-201ENST00000517555 339 ntBASIC6.26□□□□□ -1.41
RIF1Q5UIP0 IGHV4-55-201ENST00000520889 368 ntBASIC6.26□□□□□ -1.41
RIF1Q5UIP0 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 AC005839.1-201ENST00000624148 3213 ntBASIC6.26□□□□□ -1.41
RIF1Q5UIP0 PSG10P-201ENST00000501199 1500 ntBASIC6.26□□□□□ -1.41
RIF1Q5UIP0 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 RNA5SP172-201ENST00000365061 118 ntBASIC6.25□□□□□ -1.41
RIF1Q5UIP0 RN7SKP125-201ENST00000410481 302 ntBASIC6.25□□□□□ -1.41
RIF1Q5UIP0 AC011225.1-201ENST00000457751 369 ntBASIC6.25□□□□□ -1.41
RIF1Q5UIP0 AP000577.1-201ENST00000624366 878 ntBASIC6.25□□□□□ -1.41
RIF1Q5UIP0 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.25□□□□□ -1.41
RIF1Q5UIP0 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 AL139148.1-201ENST00000427122 680 ntBASIC6.25□□□□□ -1.41
RIF1Q5UIP0 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.25□□□□□ -1.41
RIF1Q5UIP0 RPS29P22-201ENST00000472363 168 ntBASIC6.25□□□□□ -1.41
RIF1Q5UIP0 AL355032.1-201ENST00000472981 438 ntBASIC6.25□□□□□ -1.41
RIF1Q5UIP0 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 AC025162.2-201ENST00000619602 560 ntBASIC6.25□□□□□ -1.41
RIF1Q5UIP0 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.25□□□□□ -1.41
RIF1Q5UIP0 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 AC092725.2-201ENST00000567658 1389 ntBASIC6.25□□□□□ -1.41
RIF1Q5UIP0 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC6.25□□□□□ -1.41
RIF1Q5UIP0 LINC02019-201ENST00000608605 2060 ntBASIC6.25□□□□□ -1.41
RIF1Q5UIP0 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 HLF-210ENST00000575345 3589 ntTSL 2 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 FTH1P20-201ENST00000434913 548 ntBASIC6.24□□□□□ -1.41
RIF1Q5UIP0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.24□□□□□ -1.41
RIF1Q5UIP0 RN7SL326P-201ENST00000477493 296 ntBASIC6.24□□□□□ -1.41
RIF1Q5UIP0 SCARNA18.1-201ENST00000516330 83 ntBASIC6.24□□□□□ -1.41
RIF1Q5UIP0 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 RPSAP73-201ENST00000614820 330 ntBASIC6.24□□□□□ -1.41
RIF1Q5UIP0 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 AL136984.1-201ENST00000607611 1893 ntBASIC6.24□□□□□ -1.41
RIF1Q5UIP0 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms