Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AL512310.3-201ENST00000547023 1335 ntBASIC8.83□□□□□ -1
PTCH1Q13635 CTAGE11P-201ENST00000451540 2353 ntBASIC8.83□□□□□ -1
PTCH1Q13635 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
PTCH1Q13635 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PTCH1Q13635 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC8.83□□□□□ -1
PTCH1Q13635 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PTCH1Q13635 FUNDC2P3-201ENST00000334716 533 ntBASIC8.83□□□□□ -1
PTCH1Q13635 MIR105-2-201ENST00000385083 81 ntBASIC8.83□□□□□ -1
PTCH1Q13635 MIR1203-201ENST00000408812 85 ntBASIC8.83□□□□□ -1
PTCH1Q13635 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC8.83□□□□□ -1
PTCH1Q13635 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC8.83□□□□□ -1
PTCH1Q13635 AL121776.1-201ENST00000429337 372 ntBASIC8.83□□□□□ -1
PTCH1Q13635 NDUFS5P5-201ENST00000437256 321 ntBASIC8.83□□□□□ -1
PTCH1Q13635 PCBP2P1-201ENST00000437262 977 ntBASIC8.83□□□□□ -1
PTCH1Q13635 AC005077.1-201ENST00000449226 375 ntBASIC8.83□□□□□ -1
PTCH1Q13635 VN1R38P-201ENST00000450265 887 ntBASIC8.83□□□□□ -1
PTCH1Q13635 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC8.83□□□□□ -1
PTCH1Q13635 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC8.83□□□□□ -1
PTCH1Q13635 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC8.83□□□□□ -1
PTCH1Q13635 RNA5SP362-201ENST00000516048 118 ntBASIC8.83□□□□□ -1
PTCH1Q13635 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC8.83□□□□□ -1
PTCH1Q13635 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC8.83□□□□□ -1
PTCH1Q13635 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC8.83□□□□□ -1
PTCH1Q13635 STARD6-202ENST00000577499 696 ntTSL 2 BASIC8.83□□□□□ -1
PTCH1Q13635 AC090616.1-201ENST00000583895 447 ntBASIC8.83□□□□□ -1
PTCH1Q13635 MRO-208ENST00000588444 866 ntTSL 3 BASIC8.83□□□□□ -1
PTCH1Q13635 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PTCH1Q13635 MIR6793-201ENST00000612376 63 ntBASIC8.83□□□□□ -1
PTCH1Q13635 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
PTCH1Q13635 WDR75-207ENST00000631047 270 ntTSL 5 BASIC8.83□□□□□ -1
PTCH1Q13635 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.83□□□□□ -1
PTCH1Q13635 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
PTCH1Q13635 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC8.83□□□□□ -1
PTCH1Q13635 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
PTCH1Q13635 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PTCH1Q13635 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
PTCH1Q13635 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
PTCH1Q13635 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
PTCH1Q13635 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC8.83□□□□□ -1
PTCH1Q13635 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.83□□□□□ -1
PTCH1Q13635 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
PTCH1Q13635 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PTCH1Q13635 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.82□□□□□ -1
PTCH1Q13635 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PTCH1Q13635 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PTCH1Q13635 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
PTCH1Q13635 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC8.82□□□□□ -1
PTCH1Q13635 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PTCH1Q13635 RNA5SP443-201ENST00000363083 132 ntBASIC8.82□□□□□ -1
PTCH1Q13635 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC8.82□□□□□ -1
PTCH1Q13635 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.82□□□□□ -1
PTCH1Q13635 AL355355.1-201ENST00000442900 793 ntBASIC8.82□□□□□ -1
PTCH1Q13635 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC8.82□□□□□ -1
PTCH1Q13635 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC8.82□□□□□ -1
PTCH1Q13635 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC8.82□□□□□ -1
PTCH1Q13635 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC8.82□□□□□ -1
PTCH1Q13635 AC092681.3-201ENST00000609463 678 ntBASIC8.82□□□□□ -1
PTCH1Q13635 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC8.82□□□□□ -1
PTCH1Q13635 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC8.82□□□□□ -1
PTCH1Q13635 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC8.82□□□□□ -1
PTCH1Q13635 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
PTCH1Q13635 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC8.82□□□□□ -1
PTCH1Q13635 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC8.82□□□□□ -1
PTCH1Q13635 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.82□□□□□ -1
PTCH1Q13635 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
PTCH1Q13635 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
PTCH1Q13635 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PTCH1Q13635 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PTCH1Q13635 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC8.82□□□□□ -1
PTCH1Q13635 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
PTCH1Q13635 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC8.82□□□□□ -1
PTCH1Q13635 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
PTCH1Q13635 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
PTCH1Q13635 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC8.81□□□□□ -1
PTCH1Q13635 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC8.81□□□□□ -1
PTCH1Q13635 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC8.81□□□□□ -1
PTCH1Q13635 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
PTCH1Q13635 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC8.81□□□□□ -1
PTCH1Q13635 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
PTCH1Q13635 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC8.81□□□□□ -1
PTCH1Q13635 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC8.81□□□□□ -1
PTCH1Q13635 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC8.81□□□□□ -1
PTCH1Q13635 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC8.81□□□□□ -1
PTCH1Q13635 GAPDHP75-201ENST00000433910 943 ntBASIC8.81□□□□□ -1
PTCH1Q13635 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC8.81□□□□□ -1
PTCH1Q13635 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC8.81□□□□□ -1
PTCH1Q13635 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC8.81□□□□□ -1
PTCH1Q13635 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC8.81□□□□□ -1
PTCH1Q13635 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC8.81□□□□□ -1
PTCH1Q13635 RN7SL515P-201ENST00000463999 297 ntBASIC8.81□□□□□ -1
PTCH1Q13635 RPSAP39-201ENST00000467439 883 ntBASIC8.81□□□□□ -1
PTCH1Q13635 AC022206.1-201ENST00000495947 347 ntBASIC8.81□□□□□ -1
PTCH1Q13635 IGKV1D-22-201ENST00000518953 324 ntBASIC8.81□□□□□ -1
PTCH1Q13635 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC8.81□□□□□ -1
PTCH1Q13635 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC8.81□□□□□ -1
PTCH1Q13635 AC135626.1-201ENST00000556983 435 ntBASIC8.81□□□□□ -1
PTCH1Q13635 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC8.81□□□□□ -1
PTCH1Q13635 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC8.81□□□□□ -1
PTCH1Q13635 AC004477.3-201ENST00000614061 590 ntBASIC8.81□□□□□ -1
PTCH1Q13635 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms