Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC4.43□□□□□ -1.7
RPL39P62891 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPL39P62891 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPL39P62891 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPL39P62891 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.43□□□□□ -1.7
RPL39P62891 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
RPL39P62891 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RPL39P62891 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.42□□□□□ -1.7
RPL39P62891 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.42□□□□□ -1.7
RPL39P62891 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.42□□□□□ -1.7
RPL39P62891 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RPL39P62891 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
RPL39P62891 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPL39P62891 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
RPL39P62891 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPL39P62891 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPL39P62891 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPL39P62891 RNA5SP514-201ENST00000363717 111 ntBASIC4.42□□□□□ -1.7
RPL39P62891 MIR99A-201ENST00000384906 81 ntBASIC4.42□□□□□ -1.7
RPL39P62891 LDHAP5-201ENST00000394996 622 ntBASIC4.42□□□□□ -1.7
RPL39P62891 AL590635.1-201ENST00000406314 586 ntBASIC4.42□□□□□ -1.7
RPL39P62891 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC4.42□□□□□ -1.7
RPL39P62891 AL359633.1-201ENST00000421403 310 ntBASIC4.42□□□□□ -1.7
RPL39P62891 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC4.42□□□□□ -1.7
RPL39P62891 ETF1P1-206ENST00000427296 984 ntBASIC4.42□□□□□ -1.7
RPL39P62891 AL590399.2-201ENST00000427536 309 ntBASIC4.42□□□□□ -1.7
RPL39P62891 AL365220.1-201ENST00000432923 399 ntBASIC4.42□□□□□ -1.7
RPL39P62891 MRPS21P3-201ENST00000436696 262 ntBASIC4.42□□□□□ -1.7
RPL39P62891 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC4.42□□□□□ -1.7
RPL39P62891 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC4.42□□□□□ -1.7
RPL39P62891 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC4.42□□□□□ -1.7
RPL39P62891 OR9A1P-202ENST00000484361 945 ntBASIC4.42□□□□□ -1.7
RPL39P62891 RN7SL445P-201ENST00000495609 293 ntBASIC4.42□□□□□ -1.7
RPL39P62891 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.42□□□□□ -1.7
RPL39P62891 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC4.42□□□□□ -1.7
RPL39P62891 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC4.42□□□□□ -1.7
RPL39P62891 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC4.42□□□□□ -1.7
RPL39P62891 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
RPL39P62891 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC4.42□□□□□ -1.7
RPL39P62891 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC4.42□□□□□ -1.7
RPL39P62891 PDCL3P1-201ENST00000534575 734 ntBASIC4.42□□□□□ -1.7
RPL39P62891 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
RPL39P62891 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC4.42□□□□□ -1.7
RPL39P62891 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC4.42□□□□□ -1.7
RPL39P62891 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC4.42□□□□□ -1.7
RPL39P62891 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC4.42□□□□□ -1.7
RPL39P62891 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC4.42□□□□□ -1.7
RPL39P62891 MIR5682-201ENST00000584864 76 ntBASIC4.42□□□□□ -1.7
RPL39P62891 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC4.42□□□□□ -1.7
RPL39P62891 RPS27AP19-201ENST00000597285 458 ntBASIC4.42□□□□□ -1.7
RPL39P62891 DIMT1P1-201ENST00000603970 763 ntBASIC4.42□□□□□ -1.7
RPL39P62891 AC019257.2-201ENST00000605539 497 ntBASIC4.42□□□□□ -1.7
RPL39P62891 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC4.42□□□□□ -1.7
RPL39P62891 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC4.42□□□□□ -1.7
RPL39P62891 MIR7848-201ENST00000617402 101 ntBASIC4.42□□□□□ -1.7
RPL39P62891 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC4.42□□□□□ -1.7
RPL39P62891 AC005753.1-201ENST00000623837 618 ntBASIC4.42□□□□□ -1.7
RPL39P62891 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC4.42□□□□□ -1.7
RPL39P62891 OR7E91P-202ENST00000642062 1198 ntBASIC4.42□□□□□ -1.7
RPL39P62891 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.42□□□□□ -1.7
RPL39P62891 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
RPL39P62891 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC4.42□□□□□ -1.7
RPL39P62891 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
RPL39P62891 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPL39P62891 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPL39P62891 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RPL39P62891 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.42□□□□□ -1.7
RPL39P62891 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC4.42□□□□□ -1.7
RPL39P62891 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RPL39P62891 KYNUP3-201ENST00000574386 1341 ntBASIC4.42□□□□□ -1.7
RPL39P62891 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPL39P62891 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.42□□□□□ -1.7
RPL39P62891 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.42□□□□□ -1.7
RPL39P62891 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.42□□□□□ -1.7
RPL39P62891 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
RPL39P62891 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RPL39P62891 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RPL39P62891 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RPL39P62891 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPL39P62891 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC4.41□□□□□ -1.7
RPL39P62891 HDAC1P2-201ENST00000453661 1398 ntBASIC4.41□□□□□ -1.7
RPL39P62891 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPL39P62891 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC4.41□□□□□ -1.7
RPL39P62891 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPL39P62891 AC140134.1-201ENST00000511830 3544 ntBASIC4.41□□□□□ -1.7
RPL39P62891 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RPL39P62891 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RPL39P62891 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC4.41□□□□□ -1.7
RPL39P62891 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPL39P62891 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.41□□□□□ -1.7
RPL39P62891 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RPL39P62891 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPL39P62891 AL138847.1-201ENST00000258651 546 ntBASIC4.41□□□□□ -1.7
RPL39P62891 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RPL39P62891 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RPL39P62891 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RPL39P62891 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RPL39P62891 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC4.41□□□□□ -1.7
RPL39P62891 AC245036.1-201ENST00000391727 309 ntBASIC4.41□□□□□ -1.7
RPL39P62891 AL391419.1-201ENST00000398901 1275 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms