Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC012078.1-201ENST00000405035 1646 ntBASIC7.79□□□□□ -1.16
RHBDL3P58872 MTHFD2P5-201ENST00000320415 844 ntBASIC7.79□□□□□ -1.16
RHBDL3P58872 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RHBDL3P58872 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.79□□□□□ -1.16
RHBDL3P58872 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
RHBDL3P58872 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
RHBDL3P58872 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
RHBDL3P58872 AC098592.2-201ENST00000413158 265 ntBASIC7.79□□□□□ -1.16
RHBDL3P58872 RPSAP65-201ENST00000429660 595 ntBASIC7.79□□□□□ -1.16
RHBDL3P58872 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.79□□□□□ -1.16
RHBDL3P58872 GTF2IP14-201ENST00000441415 586 ntBASIC7.79□□□□□ -1.16
RHBDL3P58872 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.79□□□□□ -1.16
RHBDL3P58872 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.79□□□□□ -1.16
RHBDL3P58872 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.79□□□□□ -1.16
RHBDL3P58872 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.79□□□□□ -1.16
RHBDL3P58872 AC117395.1-201ENST00000487390 403 ntBASIC7.79□□□□□ -1.16
RHBDL3P58872 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.79□□□□□ -1.16
RHBDL3P58872 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.79□□□□□ -1.16
RHBDL3P58872 AL845552.1-201ENST00000556820 323 ntBASIC7.79□□□□□ -1.16
RHBDL3P58872 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.79□□□□□ -1.16
RHBDL3P58872 AC009303.3-201ENST00000591103 736 ntBASIC7.79□□□□□ -1.16
RHBDL3P58872 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.79□□□□□ -1.16
RHBDL3P58872 AC117490.2-201ENST00000610042 594 ntBASIC7.79□□□□□ -1.16
RHBDL3P58872 MIR6071-201ENST00000616741 78 ntBASIC7.79□□□□□ -1.16
RHBDL3P58872 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.79□□□□□ -1.16
RHBDL3P58872 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.79□□□□□ -1.16
RHBDL3P58872 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RHBDL3P58872 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.79□□□□□ -1.16
RHBDL3P58872 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RHBDL3P58872 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RHBDL3P58872 AC083806.2-201ENST00000617795 2685 ntBASIC7.79□□□□□ -1.16
RHBDL3P58872 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.79□□□□□ -1.16
RHBDL3P58872 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RHBDL3P58872 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.79□□□□□ -1.16
RHBDL3P58872 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RHBDL3P58872 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.79□□□□□ -1.16
RHBDL3P58872 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.79□□□□□ -1.16
RHBDL3P58872 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.79□□□□□ -1.16
RHBDL3P58872 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.78□□□□□ -1.16
RHBDL3P58872 NEK2P4-201ENST00000425793 1329 ntBASIC7.78□□□□□ -1.16
RHBDL3P58872 AL512310.3-201ENST00000547023 1335 ntBASIC7.78□□□□□ -1.16
RHBDL3P58872 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.78□□□□□ -1.16
RHBDL3P58872 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 IFIT1P1-201ENST00000400497 1449 ntBASIC7.78□□□□□ -1.16
RHBDL3P58872 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.78□□□□□ -1.16
RHBDL3P58872 CASC19-246ENST00000641625 1606 ntBASIC7.78□□□□□ -1.16
RHBDL3P58872 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
RHBDL3P58872 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 AC007993.1-201ENST00000621298 2430 ntBASIC7.78□□□□□ -1.16
RHBDL3P58872 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
RHBDL3P58872 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 RNU6-891P-201ENST00000384280 111 ntBASIC7.78□□□□□ -1.16
RHBDL3P58872 AL157702.1-201ENST00000398764 426 ntBASIC7.78□□□□□ -1.16
RHBDL3P58872 OR7E156P-201ENST00000400303 464 ntBASIC7.78□□□□□ -1.16
RHBDL3P58872 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.78□□□□□ -1.16
RHBDL3P58872 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC7.78□□□□□ -1.16
RHBDL3P58872 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.78□□□□□ -1.16
RHBDL3P58872 OSTCP4-201ENST00000424397 449 ntBASIC7.78□□□□□ -1.16
RHBDL3P58872 AC108479.1-201ENST00000431142 427 ntBASIC7.78□□□□□ -1.16
RHBDL3P58872 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.78□□□□□ -1.16
RHBDL3P58872 AC007679.3-201ENST00000434035 414 ntBASIC7.78□□□□□ -1.16
RHBDL3P58872 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
RHBDL3P58872 AC063943.2-201ENST00000495697 534 ntBASIC7.78□□□□□ -1.16
RHBDL3P58872 AC131392.1-201ENST00000506490 633 ntBASIC7.78□□□□□ -1.16
RHBDL3P58872 GOLGA5P1-201ENST00000507317 980 ntBASIC7.78□□□□□ -1.16
RHBDL3P58872 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.78□□□□□ -1.16
RHBDL3P58872 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.78□□□□□ -1.16
RHBDL3P58872 OR4A42P-201ENST00000531397 938 ntBASIC7.78□□□□□ -1.16
RHBDL3P58872 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC7.78□□□□□ -1.16
RHBDL3P58872 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.78□□□□□ -1.16
RHBDL3P58872 AC023389.2-201ENST00000580031 955 ntBASIC7.78□□□□□ -1.16
RHBDL3P58872 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.78□□□□□ -1.16
RHBDL3P58872 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.78□□□□□ -1.16
RHBDL3P58872 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.78□□□□□ -1.16
RHBDL3P58872 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
RHBDL3P58872 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.78□□□□□ -1.16
RHBDL3P58872 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
RHBDL3P58872 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RHBDL3P58872 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.78□□□□□ -1.16
RHBDL3P58872 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.78□□□□□ -1.16
RHBDL3P58872 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
RHBDL3P58872 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
RHBDL3P58872 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
RHBDL3P58872 SMG1P5-202ENST00000529428 4219 ntBASIC7.77□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms