Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AP001033.2-201ENST00000609701 1003 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.29□□□□□ -1.4
SUMO3P55854 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.29□□□□□ -1.4
SUMO3P55854 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.29□□□□□ -1.4
SUMO3P55854 FRG1DP-201ENST00000635586 771 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SUMO3P55854 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SUMO3P55854 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SUMO3P55854 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.29□□□□□ -1.4
SUMO3P55854 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SUMO3P55854 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SUMO3P55854 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SUMO3P55854 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.28□□□□□ -1.4
SUMO3P55854 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
SUMO3P55854 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.28□□□□□ -1.4
SUMO3P55854 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
SUMO3P55854 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.28□□□□□ -1.4
SUMO3P55854 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.28□□□□□ -1.4
SUMO3P55854 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.28□□□□□ -1.4
SUMO3P55854 RNFT1P3-201ENST00000340898 1052 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 MIR99A-201ENST00000384906 81 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SUMO3P55854 RNA5SP35-201ENST00000391257 129 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 TAF9BP2-201ENST00000400856 499 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.28□□□□□ -1.4
SUMO3P55854 RPSAP60-201ENST00000415403 880 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 AL034379.1-201ENST00000423216 253 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 MTND1P10-201ENST00000426108 832 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
SUMO3P55854 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC6.28□□□□□ -1.4
SUMO3P55854 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.28□□□□□ -1.4
SUMO3P55854 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.28□□□□□ -1.4
SUMO3P55854 AL592114.2-201ENST00000440142 532 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.28□□□□□ -1.4
SUMO3P55854 AL158214.1-201ENST00000444423 404 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.28□□□□□ -1.4
SUMO3P55854 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
SUMO3P55854 OR7E7P-201ENST00000455678 1012 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 PPP1R2P6-201ENST00000478565 588 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 RPL7AP30-201ENST00000482859 796 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 AC008410.1-201ENST00000483777 339 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 RPL5P11-201ENST00000498068 893 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 AC021146.11-201ENST00000503319 491 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC6.28□□□□□ -1.4
SUMO3P55854 AC121161.1-201ENST00000510606 652 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 AC034244.2-201ENST00000514668 858 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.28□□□□□ -1.4
SUMO3P55854 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.28□□□□□ -1.4
SUMO3P55854 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.28□□□□□ -1.4
SUMO3P55854 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SUMO3P55854 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.28□□□□□ -1.4
SUMO3P55854 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
SUMO3P55854 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
SUMO3P55854 AC005632.2-201ENST00000564271 828 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.28□□□□□ -1.4
SUMO3P55854 RN7SL426P-201ENST00000579106 295 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.28□□□□□ -1.4
SUMO3P55854 FCGR1CP-201ENST00000579737 1127 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 RN7SL42P-201ENST00000579786 294 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.28□□□□□ -1.4
SUMO3P55854 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.28□□□□□ -1.4
SUMO3P55854 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.28□□□□□ -1.4
SUMO3P55854 AC027334.1-201ENST00000603257 310 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 AC067838.1-201ENST00000606064 577 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 AC004908.1-201ENST00000606572 541 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 AC008759.3-201ENST00000613300 508 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.28□□□□□ -1.4
SUMO3P55854 AC027506.1-201ENST00000621395 198 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 AC131009.3-201ENST00000621809 287 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.28□□□□□ -1.4
SUMO3P55854 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.28□□□□□ -1.4
SUMO3P55854 AC025262.3-201ENST00000623666 360 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 RPSAP68-201ENST00000625020 438 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 AP003485.1-201ENST00000625093 753 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 AC006453.3-201ENST00000635891 377 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 AC009452.1-201ENST00000640823 606 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SUMO3P55854 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.28□□□□□ -1.4
SUMO3P55854 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SUMO3P55854 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms