Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HMGCS2P54868 SNORA11B-201ENST00000408175 129 ntBASIC7.39□□□□□ -1.23
HMGCS2P54868 RN7SKP206-201ENST00000410823 293 ntBASIC7.39□□□□□ -1.23
HMGCS2P54868 RN7SKP144-201ENST00000411108 279 ntBASIC7.39□□□□□ -1.23
HMGCS2P54868 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC7.39□□□□□ -1.23
HMGCS2P54868 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.39□□□□□ -1.23
HMGCS2P54868 CDY8P-201ENST00000428380 1279 ntBASIC7.39□□□□□ -1.23
HMGCS2P54868 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.39□□□□□ -1.23
HMGCS2P54868 CDY20P-201ENST00000447528 1279 ntBASIC7.39□□□□□ -1.23
HMGCS2P54868 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.39□□□□□ -1.23
HMGCS2P54868 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.39□□□□□ -1.23
HMGCS2P54868 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.39□□□□□ -1.23
HMGCS2P54868 RN7SL101P-201ENST00000496350 279 ntBASIC7.39□□□□□ -1.23
HMGCS2P54868 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.39□□□□□ -1.23
HMGCS2P54868 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.39□□□□□ -1.23
HMGCS2P54868 IGHV3-57-201ENST00000520143 280 ntBASIC7.39□□□□□ -1.23
HMGCS2P54868 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.39□□□□□ -1.23
HMGCS2P54868 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.39□□□□□ -1.23
HMGCS2P54868 AL512652.1-201ENST00000619006 500 ntBASIC7.39□□□□□ -1.23
HMGCS2P54868 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.39□□□□□ -1.23
HMGCS2P54868 MIR4302-201ENST00000638058 60 ntBASIC7.39□□□□□ -1.23
HMGCS2P54868 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC7.39□□□□□ -1.23
HMGCS2P54868 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HMGCS2P54868 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HMGCS2P54868 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HMGCS2P54868 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HMGCS2P54868 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
HMGCS2P54868 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.39□□□□□ -1.23
HMGCS2P54868 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.38□□□□□ -1.23
HMGCS2P54868 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HMGCS2P54868 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HMGCS2P54868 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HMGCS2P54868 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HMGCS2P54868 AL596244.1-201ENST00000567068 3779 ntBASIC7.38□□□□□ -1.23
HMGCS2P54868 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
HMGCS2P54868 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HMGCS2P54868 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.38□□□□□ -1.23
HMGCS2P54868 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HMGCS2P54868 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HMGCS2P54868 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.38□□□□□ -1.23
HMGCS2P54868 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
HMGCS2P54868 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HMGCS2P54868 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HMGCS2P54868 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
HMGCS2P54868 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.38□□□□□ -1.23
HMGCS2P54868 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
HMGCS2P54868 AC023490.2-201ENST00000359859 470 ntBASIC7.38□□□□□ -1.23
HMGCS2P54868 SUGT1P2-201ENST00000379452 992 ntBASIC7.38□□□□□ -1.23
HMGCS2P54868 AL031985.1-201ENST00000392713 418 ntBASIC7.38□□□□□ -1.23
HMGCS2P54868 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC7.38□□□□□ -1.23
HMGCS2P54868 AL512422.1-201ENST00000407033 553 ntBASIC7.38□□□□□ -1.23
HMGCS2P54868 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HMGCS2P54868 RPS7P14-201ENST00000426405 583 ntBASIC7.38□□□□□ -1.23
HMGCS2P54868 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.38□□□□□ -1.23
HMGCS2P54868 HIGD1AP16-201ENST00000450986 258 ntBASIC7.38□□□□□ -1.23
HMGCS2P54868 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.38□□□□□ -1.23
HMGCS2P54868 MTATP6P1-201ENST00000514057 681 ntBASIC7.38□□□□□ -1.23
HMGCS2P54868 OR5H7P-201ENST00000514084 930 ntBASIC7.38□□□□□ -1.23
HMGCS2P54868 SNORA81.2-201ENST00000516868 170 ntBASIC7.38□□□□□ -1.23
HMGCS2P54868 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.38□□□□□ -1.23
HMGCS2P54868 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.38□□□□□ -1.23
HMGCS2P54868 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HMGCS2P54868 RFPL4AP6-201ENST00000616792 846 ntBASIC7.38□□□□□ -1.23
HMGCS2P54868 AC129778.1-202ENST00000623812 261 ntBASIC7.38□□□□□ -1.23
HMGCS2P54868 AC103703.1-201ENST00000634783 663 ntBASIC7.38□□□□□ -1.23
HMGCS2P54868 AL591379.1-207ENST00000635982 261 ntBASIC7.38□□□□□ -1.23
HMGCS2P54868 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.38□□□□□ -1.23
HMGCS2P54868 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.38□□□□□ -1.23
HMGCS2P54868 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
HMGCS2P54868 AL023806.3-201ENST00000638502 2704 ntBASIC7.38□□□□□ -1.23
HMGCS2P54868 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.38□□□□□ -1.23
HMGCS2P54868 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
HMGCS2P54868 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.38□□□□□ -1.23
HMGCS2P54868 EIF3EP2-201ENST00000423042 1814 ntBASIC7.38□□□□□ -1.23
HMGCS2P54868 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
HMGCS2P54868 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
HMGCS2P54868 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HMGCS2P54868 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HMGCS2P54868 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
HMGCS2P54868 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
HMGCS2P54868 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
HMGCS2P54868 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HMGCS2P54868 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
HMGCS2P54868 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.37□□□□□ -1.23
HMGCS2P54868 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
HMGCS2P54868 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HMGCS2P54868 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
HMGCS2P54868 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
HMGCS2P54868 RN7SKP121-201ENST00000410842 305 ntBASIC7.37□□□□□ -1.23
HMGCS2P54868 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.37□□□□□ -1.23
HMGCS2P54868 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HMGCS2P54868 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.37□□□□□ -1.23
HMGCS2P54868 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.37□□□□□ -1.23
HMGCS2P54868 RN7SL326P-201ENST00000477493 296 ntBASIC7.37□□□□□ -1.23
HMGCS2P54868 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.37□□□□□ -1.23
HMGCS2P54868 MTND6P8-201ENST00000503471 522 ntBASIC7.37□□□□□ -1.23
HMGCS2P54868 AC095057.1-201ENST00000507583 168 ntBASIC7.37□□□□□ -1.23
HMGCS2P54868 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.37□□□□□ -1.23
HMGCS2P54868 PRMT5P1-201ENST00000514351 598 ntBASIC7.37□□□□□ -1.23
HMGCS2P54868 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms