Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
RXRBP28702 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
RXRBP28702 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC8.85□□□□□ -0.99
RXRBP28702 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC8.85□□□□□ -0.99
RXRBP28702 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
RXRBP28702 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
RXRBP28702 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
RXRBP28702 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
RXRBP28702 RNY3P9-201ENST00000384727 106 ntBASIC8.85□□□□□ -0.99
RXRBP28702 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
RXRBP28702 OR3A2-201ENST00000408891 1076 ntBASIC8.85□□□□□ -0.99
RXRBP28702 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC8.85□□□□□ -0.99
RXRBP28702 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC8.85□□□□□ -0.99
RXRBP28702 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC8.85□□□□□ -0.99
RXRBP28702 AC073143.1-201ENST00000436316 395 ntBASIC8.85□□□□□ -0.99
RXRBP28702 AC016908.1-201ENST00000442571 1219 ntBASIC8.85□□□□□ -0.99
RXRBP28702 AP000281.1-201ENST00000444036 316 ntBASIC8.85□□□□□ -0.99
RXRBP28702 YWHAEP1-201ENST00000453697 763 ntBASIC8.85□□□□□ -0.99
RXRBP28702 EIF2S2P4-201ENST00000461070 984 ntBASIC8.85□□□□□ -0.99
RXRBP28702 PFN1P6-201ENST00000476786 399 ntBASIC8.85□□□□□ -0.99
RXRBP28702 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC8.85□□□□□ -0.99
RXRBP28702 AGGF1P3-201ENST00000493675 1213 ntBASIC8.85□□□□□ -0.99
RXRBP28702 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC8.85□□□□□ -0.99
RXRBP28702 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC8.85□□□□□ -0.99
RXRBP28702 PRMT5P1-201ENST00000514351 598 ntBASIC8.85□□□□□ -0.99
RXRBP28702 RN7SKP238-201ENST00000516483 249 ntBASIC8.85□□□□□ -0.99
RXRBP28702 AC021001.1-201ENST00000518703 987 ntBASIC8.85□□□□□ -0.99
RXRBP28702 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC8.85□□□□□ -0.99
RXRBP28702 PTS-202ENST00000524931 696 ntTSL 3 BASIC8.85□□□□□ -0.99
RXRBP28702 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC8.85□□□□□ -0.99
RXRBP28702 AL133399.1-201ENST00000527476 298 ntBASIC8.85□□□□□ -0.99
RXRBP28702 AC007956.1-201ENST00000555623 542 ntBASIC8.85□□□□□ -0.99
RXRBP28702 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC8.85□□□□□ -0.99
RXRBP28702 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
RXRBP28702 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC8.85□□□□□ -0.99
RXRBP28702 AC133794.1-201ENST00000602731 914 ntBASIC8.85□□□□□ -0.99
RXRBP28702 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC8.85□□□□□ -0.99
RXRBP28702 AP001264.1-201ENST00000620602 703 ntBASIC8.85□□□□□ -0.99
RXRBP28702 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC8.85□□□□□ -0.99
RXRBP28702 AL049536.1-201ENST00000625043 744 ntBASIC8.85□□□□□ -0.99
RXRBP28702 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC8.85□□□□□ -0.99
RXRBP28702 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC8.85□□□□□ -0.99
RXRBP28702 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
RXRBP28702 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
RXRBP28702 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
RXRBP28702 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC8.85□□□□□ -0.99
RXRBP28702 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC8.85□□□□□ -0.99
RXRBP28702 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
RXRBP28702 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
RXRBP28702 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC8.85□□□□□ -0.99
RXRBP28702 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
RXRBP28702 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
RXRBP28702 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
RXRBP28702 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
RXRBP28702 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
RXRBP28702 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
RXRBP28702 AL136146.1-201ENST00000529830 1667 ntBASIC8.85□□□□□ -0.99
RXRBP28702 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC8.84□□□□□ -0.99
RXRBP28702 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RXRBP28702 MAPK10-285ENST00000641207 2746 ntBASIC8.84□□□□□ -0.99
RXRBP28702 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RXRBP28702 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RXRBP28702 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RXRBP28702 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.84□□□□□ -0.99
RXRBP28702 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
RXRBP28702 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC8.84□□□□□ -0.99
RXRBP28702 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RXRBP28702 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
RXRBP28702 AL157702.1-201ENST00000398764 426 ntBASIC8.84□□□□□ -0.99
RXRBP28702 DHFRP5-201ENST00000406944 564 ntBASIC8.84□□□□□ -0.99
RXRBP28702 RPL31P11-201ENST00000426558 1558 ntBASIC8.84□□□□□ -0.99
RXRBP28702 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC8.84□□□□□ -0.99
RXRBP28702 AC004854.1-201ENST00000440356 349 ntBASIC8.84□□□□□ -0.99
RXRBP28702 AC064862.4-201ENST00000442180 334 ntBASIC8.84□□□□□ -0.99
RXRBP28702 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC8.84□□□□□ -0.99
RXRBP28702 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC8.84□□□□□ -0.99
RXRBP28702 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC8.84□□□□□ -0.99
RXRBP28702 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC8.84□□□□□ -0.99
RXRBP28702 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC8.84□□□□□ -0.99
RXRBP28702 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
RXRBP28702 AP003033.1-201ENST00000527244 415 ntBASIC8.84□□□□□ -0.99
RXRBP28702 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
RXRBP28702 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
RXRBP28702 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC8.84□□□□□ -0.99
RXRBP28702 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC8.84□□□□□ -0.99
RXRBP28702 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC8.84□□□□□ -0.99
RXRBP28702 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC8.84□□□□□ -0.99
RXRBP28702 ABI1P1-201ENST00000603375 1120 ntBASIC8.84□□□□□ -0.99
RXRBP28702 AC006924.1-201ENST00000610750 559 ntBASIC8.84□□□□□ -0.99
RXRBP28702 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC8.84□□□□□ -0.99
RXRBP28702 AC112694.2-201ENST00000623697 768 ntBASIC8.84□□□□□ -0.99
RXRBP28702 AC004943.3-201ENST00000624116 600 ntBASIC8.84□□□□□ -0.99
RXRBP28702 AC097372.4-201ENST00000625025 466 ntBASIC8.84□□□□□ -0.99
RXRBP28702 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC8.84□□□□□ -0.99
RXRBP28702 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC8.84□□□□□ -0.99
RXRBP28702 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RXRBP28702 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RXRBP28702 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC8.84□□□□□ -0.99
RXRBP28702 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC8.84□□□□□ -0.99
RXRBP28702 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms