Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC022613.3-201ENST00000560740 1346 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 ZNF969P-201ENST00000510345 2341 ntBASIC4.94□□□□□ -1.62
HLA-DRB4X5D2U9 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 SELE-203ENST00000367775 3389 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC074141.1-201ENST00000588129 2995 ntBASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC009831.5-201ENST00000624000 3189 ntBASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 RNA5SP188-201ENST00000362916 129 ntBASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 RNU1-46P-201ENST00000384425 164 ntBASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC019178.1-201ENST00000392337 440 ntBASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 NME1P1-201ENST00000420914 382 ntBASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AL355355.1-201ENST00000442900 793 ntBASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC022080.2-201ENST00000452932 533 ntBASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 RN7SKP198-201ENST00000459286 306 ntBASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AL079303.1-201ENST00000486611 463 ntBASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC018639.1-201ENST00000492994 442 ntBASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 OR52H2P-201ENST00000514607 902 ntBASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 GNG2-203ENST00000553432 577 ntTSL 4 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AP003115.1-201ENST00000569849 463 ntBASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 MIR3159-201ENST00000584572 74 ntBASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AL356986.1-201ENST00000604085 341 ntBASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AL137000.1-201ENST00000610528 1244 ntBASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC005277.2-201ENST00000617898 390 ntBASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 TEX41-255ENST00000626404 610 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DRB4X5D2U9 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AP000432.2-201ENST00000624164 2048 ntBASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms