Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 AC092701.1-201ENST00000623627 1551 ntBASIC5.72□□□□□ -1.49
RHBDD3Q9Y3P4 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
RHBDD3Q9Y3P4 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
RHBDD3Q9Y3P4 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.71□□□□□ -1.49
RHBDD3Q9Y3P4 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
RHBDD3Q9Y3P4 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.71□□□□□ -1.49
RHBDD3Q9Y3P4 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RHBDD3Q9Y3P4 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AP003170.5-201ENST00000397185 335 ntBASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AL023284.3-201ENST00000407767 334 ntBASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 RNA5SP251-201ENST00000410614 137 ntBASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 RN7SKP91-201ENST00000410852 288 ntBASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AC009237.1-201ENST00000442127 744 ntBASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 GAPDHP20-201ENST00000444107 1007 ntBASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AL356133.1-201ENST00000444762 372 ntBASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 RPL26P30-201ENST00000453533 435 ntBASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AC073648.3-201ENST00000504939 925 ntBASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 RNA5SP75-201ENST00000516841 111 ntBASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AC007068.2-201ENST00000543168 395 ntBASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AL445383.1-201ENST00000554689 874 ntBASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AC099777.1-201ENST00000603779 1070 ntBASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 DIMT1P1-201ENST00000603970 763 ntBASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AC004241.2-201ENST00000614562 444 ntBASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AC061999.1-201ENST00000624454 177 ntBASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 CASC19-228ENST00000641414 1684 ntBASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AL512353.3-201ENST00000417517 1326 ntBASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 AC079753.1-201ENST00000623243 3868 ntBASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDD3Q9Y3P4 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AC004014.2-201ENST00000623718 5122 ntBASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 FAM32BP-201ENST00000344033 333 ntBASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 RNU1-46P-201ENST00000384425 164 ntBASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 RPL7P58-201ENST00000402913 758 ntBASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 GAPDHP75-201ENST00000433910 943 ntBASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 MGAT2P1-201ENST00000449718 797 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms