Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC092634.1-201ENST00000366505 199 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 MIR640-201ENST00000385086 96 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 RNU6-1176P-201ENST00000390955 107 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 AL353133.1-201ENST00000407695 401 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 DUTP4-201ENST00000424782 475 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 PSMD8P1-201ENST00000436275 769 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 WDR82P2-201ENST00000444540 928 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 RAD1P2-201ENST00000446414 663 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 PPIAP32-201ENST00000449940 472 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 RN7SKP198-201ENST00000459286 306 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 AC018635.1-201ENST00000468292 1030 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 RN7SL216P-201ENST00000471607 298 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 RPS7P11-201ENST00000484240 586 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 RPL5P33-201ENST00000487833 905 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 AC010442.1-201ENST00000515583 816 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 IGKV2D-38-201ENST00000518423 240 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 RPAP2P1-201ENST00000603626 1168 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 AC011458.1-201ENST00000604034 617 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 AC138473.1-201ENST00000605717 526 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 MIR6849-201ENST00000618543 69 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 AC005858.3-201ENST00000624756 589 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 AC005618.1-201ENST00000606901 3148 ntBASIC6.87□□□□□ -1.31
DKK3Q9UBP4 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
DKK3Q9UBP4 AC012213.2-201ENST00000562917 4597 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AC140479.2-201ENST00000421567 3130 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 RNA5SP474-201ENST00000391234 90 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 GAPDHP57-201ENST00000424400 585 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AL390879.2-203ENST00000426943 1121 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AL138899.2-201ENST00000439139 499 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 GAPDHP20-201ENST00000444107 1007 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 RN7SL187P-201ENST00000495587 303 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AC009567.2-201ENST00000502989 349 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AC114324.2-202ENST00000503812 134 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AC138517.1-201ENST00000515724 568 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 OR9L1P-201ENST00000529493 933 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 SNORA70D-201ENST00000578836 135 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 RPL7AP69-201ENST00000595306 806 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms