Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6□□□□□ -1.45
CHD8Q9HCK8 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6□□□□□ -1.45
CHD8Q9HCK8 HMGN2P6-201ENST00000551091 273 ntBASIC6□□□□□ -1.45
CHD8Q9HCK8 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CHD8Q9HCK8 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6□□□□□ -1.45
CHD8Q9HCK8 AC111186.1-201ENST00000604684 130 ntBASIC6□□□□□ -1.45
CHD8Q9HCK8 AC083809.1-201ENST00000615051 472 ntBASIC6□□□□□ -1.45
CHD8Q9HCK8 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 Y_RNA.126-201ENST00000363382 111 ntBASIC5.99□□□□□ -1.45
CHD8Q9HCK8 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 RN7SKP121-201ENST00000410842 305 ntBASIC5.99□□□□□ -1.45
CHD8Q9HCK8 CFL1P1-202ENST00000432948 411 ntBASIC5.99□□□□□ -1.45
CHD8Q9HCK8 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 AC044797.1-201ENST00000445744 679 ntBASIC5.99□□□□□ -1.45
CHD8Q9HCK8 RAB28P2-201ENST00000454299 641 ntBASIC5.99□□□□□ -1.45
CHD8Q9HCK8 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 BNIP3P5-201ENST00000562290 498 ntBASIC5.99□□□□□ -1.45
CHD8Q9HCK8 CCDC58P3-201ENST00000590792 430 ntBASIC5.99□□□□□ -1.45
CHD8Q9HCK8 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 AC090771.1-201ENST00000585803 1618 ntBASIC5.99□□□□□ -1.45
CHD8Q9HCK8 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 AKAP4-202ENST00000376064 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 AC022150.4-201ENST00000598322 2848 ntBASIC5.99□□□□□ -1.45
CHD8Q9HCK8 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 SUMO2P3-201ENST00000438311 288 ntBASIC5.99□□□□□ -1.45
CHD8Q9HCK8 AL133445.1-201ENST00000467051 452 ntBASIC5.99□□□□□ -1.45
CHD8Q9HCK8 AC137768.1-201ENST00000549998 553 ntBASIC5.99□□□□□ -1.45
CHD8Q9HCK8 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 AC091078.2-201ENST00000557145 559 ntBASIC5.99□□□□□ -1.45
CHD8Q9HCK8 AP003115.1-201ENST00000569849 463 ntBASIC5.99□□□□□ -1.45
CHD8Q9HCK8 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC5.99□□□□□ -1.45
CHD8Q9HCK8 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 AC104581.5-201ENST00000624171 7141 ntBASIC5.98□□□□□ -1.45
CHD8Q9HCK8 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 AL136984.1-201ENST00000607611 1893 ntBASIC5.98□□□□□ -1.45
CHD8Q9HCK8 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms