Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 NPR3-202ENST00000326958 6380 ntTSL 2 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 AC110373.1-201ENST00000505994 3505 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 RN7SKP77-201ENST00000363261 353 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 RN7SKP124-201ENST00000364730 341 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 AL049697.3-201ENST00000406493 982 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 ANKRD54P1-201ENST00000433115 471 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 AL139156.3-201ENST00000454802 394 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 IGLV2-28-201ENST00000520681 304 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 OR8G3P-201ENST00000533406 921 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 AC130448.2-201ENST00000624082 374 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 AC005034.3-201ENST00000604845 1747 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 RASSF2-202ENST00000379400 5427 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 AL161756.3-201ENST00000641216 2071 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 AL133243.4-201ENST00000623116 3109 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 RNU1-19P-201ENST00000363306 165 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 HMGB1P20-201ENST00000402555 677 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 RPL35AP31-201ENST00000418340 337 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 RPL12P3-201ENST00000440080 396 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 OR13C1P-201ENST00000457612 963 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 BX284632.1-201ENST00000478218 541 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 CU639417.4-201ENST00000623928 207 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 AC138915.4-201ENST00000565549 4147 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 CNTNAP3B-211ENST00000612828 7455 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 UTY-215ENST00000618474 6277 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 FABP12P1-201ENST00000401911 322 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 RANP2-201ENST00000456833 229 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 AC090616.1-201ENST00000583895 447 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 PTGS1-207ENST00000619306 5051 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 NEPNP-201ENST00000404786 1371 ntBASIC4.23□□□□□ -1.73
ALMS1Q8TCU4 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 GNL2P1-201ENST00000451274 2190 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 DPY19L4-201ENST00000414645 6197 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 NRIP1-202ENST00000400199 7562 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 AC008953.1-201ENST00000497334 318 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 SETP21-201ENST00000514799 892 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms