Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.72□□□□□ -1.49
ZFHX4Q86UP3 RIPOR2-201ENST00000259698 5471 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZFHX4Q86UP3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
ZFHX4Q86UP3 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC5.72□□□□□ -1.49
ZFHX4Q86UP3 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC5.72□□□□□ -1.49
ZFHX4Q86UP3 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
ZFHX4Q86UP3 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ZFHX4Q86UP3 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ZFHX4Q86UP3 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZFHX4Q86UP3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
ZFHX4Q86UP3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.71□□□□□ -1.49
ZFHX4Q86UP3 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.71□□□□□ -1.49
ZFHX4Q86UP3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.71□□□□□ -1.49
ZFHX4Q86UP3 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC5.71□□□□□ -1.49
ZFHX4Q86UP3 RN7SL205P-201ENST00000490174 284 ntBASIC5.71□□□□□ -1.49
ZFHX4Q86UP3 AC022832.1-201ENST00000530718 645 ntBASIC5.71□□□□□ -1.49
ZFHX4Q86UP3 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.71□□□□□ -1.49
ZFHX4Q86UP3 AC034105.4-201ENST00000568304 277 ntBASIC5.71□□□□□ -1.49
ZFHX4Q86UP3 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.71□□□□□ -1.49
ZFHX4Q86UP3 RN7SL52P-201ENST00000584271 284 ntBASIC5.71□□□□□ -1.49
ZFHX4Q86UP3 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.71□□□□□ -1.49
ZFHX4Q86UP3 RN7SL722P-201ENST00000617780 284 ntBASIC5.71□□□□□ -1.49
ZFHX4Q86UP3 RN7SL565P-201ENST00000618246 284 ntBASIC5.71□□□□□ -1.49
ZFHX4Q86UP3 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC5.71□□□□□ -1.49
ZFHX4Q86UP3 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC5.71□□□□□ -1.49
ZFHX4Q86UP3 PLAGL2-201ENST00000246229 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
ZFHX4Q86UP3 RNF165-201ENST00000269439 7596 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
ZFHX4Q86UP3 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 MAPKBP1-202ENST00000457542 7232 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 GABRA1-203ENST00000428797 4285 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 GOLGA8EP-202ENST00000620011 5241 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 MEG3-220ENST00000522771 6984 ntTSL 5 BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 RNA5SP388-201ENST00000362584 119 ntBASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 RNA5SP87-201ENST00000384155 118 ntBASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 AL139156.3-201ENST00000454802 394 ntBASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 RN7SL714P-201ENST00000487050 298 ntBASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 ARMC9-214ENST00000611582 5759 ntTSL 5 BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 SLC38A1-201ENST00000398637 8066 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 AC092724.1-201ENST00000624623 3397 ntBASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 ZNF548-202ENST00000366197 4955 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 ZAN-207ENST00000620596 8396 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 CYCSP12-201ENST00000437729 300 ntBASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 AC092865.4-201ENST00000477936 615 ntBASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 AC090958.1-201ENST00000511122 351 ntBASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 AC136624.4-201ENST00000573044 370 ntBASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 MIR4429-201ENST00000580105 73 ntBASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 MIR3124-201ENST00000582636 67 ntBASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 AC091193.1-201ENST00000604640 448 ntBASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 AC026367.2-201ENST00000610630 553 ntBASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 AC010998.3-201ENST00000613871 631 ntBASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 ABCC11-203ENST00000394747 4862 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 PRDM1-201ENST00000369089 4675 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ZFHX4Q86UP3 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 C4BPAP2-201ENST00000428434 478 ntBASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 AC010857.1-201ENST00000606398 594 ntBASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 OR7A1P-202ENST00000641542 1158 ntBASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 MAMLD1-204ENST00000426613 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 BOD1L1-201ENST00000040738 10565 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 TNXB-201ENST00000375244 13132 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 SLC6A4-201ENST00000261707 6604 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 AL139039.2-201ENST00000407436 479 ntBASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 AL590139.1-201ENST00000416267 400 ntBASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 AC100832.1-201ENST00000471945 383 ntBASIC5.7□□□□□ -1.5
ZFHX4Q86UP3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms