Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AL133243.2-201ENST00000610331 1621 ntBASIC6.28□□□□□ -1.4
RIF1Q5UIP0 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.27□□□□□ -1.4
RIF1Q5UIP0 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.27□□□□□ -1.4
RIF1Q5UIP0 AL512605.1-202ENST00000441919 381 ntBASIC6.27□□□□□ -1.4
RIF1Q5UIP0 AL359955.2-201ENST00000445380 353 ntBASIC6.27□□□□□ -1.4
RIF1Q5UIP0 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
RIF1Q5UIP0 AZGP1P2-201ENST00000454506 345 ntBASIC6.27□□□□□ -1.4
RIF1Q5UIP0 CEACAMP10-202ENST00000495431 496 ntBASIC6.27□□□□□ -1.4
RIF1Q5UIP0 OR51A1P-201ENST00000511110 946 ntBASIC6.27□□□□□ -1.4
RIF1Q5UIP0 AC004825.1-201ENST00000555068 586 ntBASIC6.27□□□□□ -1.4
RIF1Q5UIP0 AC091078.2-201ENST00000557145 559 ntBASIC6.27□□□□□ -1.4
RIF1Q5UIP0 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.4
RIF1Q5UIP0 RPL10P14-201ENST00000565265 298 ntBASIC6.27□□□□□ -1.4
RIF1Q5UIP0 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.27□□□□□ -1.4
RIF1Q5UIP0 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.27□□□□□ -1.4
RIF1Q5UIP0 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.27□□□□□ -1.4
RIF1Q5UIP0 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.27□□□□□ -1.4
RIF1Q5UIP0 AC004808.2-201ENST00000627965 773 ntBASIC6.27□□□□□ -1.4
RIF1Q5UIP0 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.27□□□□□ -1.4
RIF1Q5UIP0 AC027279.4-201ENST00000624371 2072 ntBASIC6.27□□□□□ -1.41
RIF1Q5UIP0 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 GAPDHP75-201ENST00000433910 943 ntBASIC6.27□□□□□ -1.41
RIF1Q5UIP0 VN1R110P-201ENST00000438988 971 ntBASIC6.27□□□□□ -1.41
RIF1Q5UIP0 EEF1B2P5-201ENST00000444820 548 ntBASIC6.27□□□□□ -1.41
RIF1Q5UIP0 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 AC004453.1-201ENST00000487895 408 ntBASIC6.27□□□□□ -1.41
RIF1Q5UIP0 RN7SL184P-201ENST00000488308 297 ntBASIC6.27□□□□□ -1.41
RIF1Q5UIP0 OR4D12P-201ENST00000509361 911 ntBASIC6.27□□□□□ -1.41
RIF1Q5UIP0 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 IMMP1LP3-201ENST00000604197 224 ntBASIC6.27□□□□□ -1.41
RIF1Q5UIP0 AC073046.2-201ENST00000604756 527 ntBASIC6.27□□□□□ -1.41
RIF1Q5UIP0 AL139407.1-201ENST00000613826 1175 ntBASIC6.27□□□□□ -1.41
RIF1Q5UIP0 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
RIF1Q5UIP0 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 RN7SKP161-201ENST00000411110 305 ntBASIC6.26□□□□□ -1.41
RIF1Q5UIP0 MAPK6PS6-201ENST00000420752 1053 ntBASIC6.26□□□□□ -1.41
RIF1Q5UIP0 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 SUMO2P3-201ENST00000438311 288 ntBASIC6.26□□□□□ -1.41
RIF1Q5UIP0 CBX1P2-201ENST00000453841 458 ntBASIC6.26□□□□□ -1.41
RIF1Q5UIP0 RPSAP50-201ENST00000481955 852 ntBASIC6.26□□□□□ -1.41
RIF1Q5UIP0 AC004815.1-201ENST00000484185 331 ntBASIC6.26□□□□□ -1.41
RIF1Q5UIP0 AC253576.1-201ENST00000511645 1156 ntBASIC6.26□□□□□ -1.41
RIF1Q5UIP0 AC084337.1-201ENST00000524809 686 ntBASIC6.26□□□□□ -1.41
RIF1Q5UIP0 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 AC007938.1-201ENST00000562524 2902 ntBASIC6.26□□□□□ -1.41
RIF1Q5UIP0 MALAT1-201ENST00000508832 1519 ntTSL 2 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RIF1Q5UIP0 FBXL21-201ENST00000297158 1305 ntBASIC6.26□□□□□ -1.41
RIF1Q5UIP0 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms