Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
EFNB3Q15768 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.77□□□□□ -1.49
EFNB3Q15768 BX284613.1-201ENST00000452221 1641 ntBASIC5.77□□□□□ -1.49
EFNB3Q15768 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
EFNB3Q15768 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
EFNB3Q15768 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
EFNB3Q15768 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
EFNB3Q15768 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
EFNB3Q15768 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
EFNB3Q15768 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
EFNB3Q15768 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
EFNB3Q15768 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
EFNB3Q15768 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.76□□□□□ -1.49
EFNB3Q15768 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.76□□□□□ -1.49
EFNB3Q15768 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.76□□□□□ -1.49
EFNB3Q15768 CA10-204ENST00000570565 2276 ntTSL 5 BASIC5.76□□□□□ -1.49
EFNB3Q15768 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
EFNB3Q15768 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.76□□□□□ -1.49
EFNB3Q15768 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
EFNB3Q15768 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 UBTFL2-201ENST00000411859 1191 ntBASIC5.76□□□□□ -1.49
EFNB3Q15768 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.76□□□□□ -1.49
EFNB3Q15768 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.76□□□□□ -1.49
EFNB3Q15768 BMP6P1-201ENST00000431230 679 ntBASIC5.76□□□□□ -1.49
EFNB3Q15768 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.76□□□□□ -1.49
EFNB3Q15768 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.76□□□□□ -1.49
EFNB3Q15768 ZFAND6P1-201ENST00000434138 605 ntBASIC5.76□□□□□ -1.49
EFNB3Q15768 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.76□□□□□ -1.49
EFNB3Q15768 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.76□□□□□ -1.49
EFNB3Q15768 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.76□□□□□ -1.49
EFNB3Q15768 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.76□□□□□ -1.49
EFNB3Q15768 UBBP5-201ENST00000446970 266 ntBASIC5.76□□□□□ -1.49
EFNB3Q15768 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 AC099670.1-201ENST00000455141 783 ntBASIC5.76□□□□□ -1.49
EFNB3Q15768 RPL31P53-201ENST00000457065 348 ntBASIC5.76□□□□□ -1.49
EFNB3Q15768 RN7SL834P-201ENST00000461450 286 ntBASIC5.76□□□□□ -1.49
EFNB3Q15768 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.76□□□□□ -1.49
EFNB3Q15768 TRBV8-1-201ENST00000481590 279 ntBASIC5.76□□□□□ -1.49
EFNB3Q15768 OR2A3P-201ENST00000493774 953 ntBASIC5.76□□□□□ -1.49
EFNB3Q15768 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.76□□□□□ -1.49
EFNB3Q15768 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC5.76□□□□□ -1.49
EFNB3Q15768 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.76□□□□□ -1.49
EFNB3Q15768 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.76□□□□□ -1.49
EFNB3Q15768 LECT2-203ENST00000512872 762 ntTSL 5 BASIC5.76□□□□□ -1.49
EFNB3Q15768 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.76□□□□□ -1.49
EFNB3Q15768 RN7SKP98-201ENST00000517070 156 ntBASIC5.76□□□□□ -1.49
EFNB3Q15768 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.76□□□□□ -1.49
EFNB3Q15768 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC5.76□□□□□ -1.49
EFNB3Q15768 AC092451.2-201ENST00000538746 658 ntBASIC5.76□□□□□ -1.49
EFNB3Q15768 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.76□□□□□ -1.49
EFNB3Q15768 AL591767.3-201ENST00000554632 525 ntBASIC5.76□□□□□ -1.49
EFNB3Q15768 AL445383.1-201ENST00000554689 874 ntBASIC5.76□□□□□ -1.49
EFNB3Q15768 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.76□□□□□ -1.49
EFNB3Q15768 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.76□□□□□ -1.49
EFNB3Q15768 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.76□□□□□ -1.49
EFNB3Q15768 CTSLP2-201ENST00000580501 394 ntBASIC5.76□□□□□ -1.49
EFNB3Q15768 RPL29P33-201ENST00000587474 316 ntBASIC5.76□□□□□ -1.49
EFNB3Q15768 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.76□□□□□ -1.49
EFNB3Q15768 AC009032.1-201ENST00000617574 431 ntBASIC5.76□□□□□ -1.49
EFNB3Q15768 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC5.76□□□□□ -1.49
EFNB3Q15768 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC5.76□□□□□ -1.49
EFNB3Q15768 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC5.76□□□□□ -1.49
EFNB3Q15768 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
EFNB3Q15768 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
EFNB3Q15768 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
EFNB3Q15768 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
EFNB3Q15768 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
EFNB3Q15768 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
EFNB3Q15768 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
EFNB3Q15768 KCNMB3P1-202ENST00000493696 3389 ntBASIC5.75□□□□□ -1.49
EFNB3Q15768 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
EFNB3Q15768 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC5.75□□□□□ -1.49
EFNB3Q15768 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC5.75□□□□□ -1.49
EFNB3Q15768 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
EFNB3Q15768 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
EFNB3Q15768 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
EFNB3Q15768 RPL12P13-201ENST00000310055 497 ntBASIC5.75□□□□□ -1.49
EFNB3Q15768 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms