Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLRN1P58418 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
CLRN1P58418 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLRN1P58418 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLRN1P58418 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.28□□□□□ -1.4
CLRN1P58418 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.28□□□□□ -1.4
CLRN1P58418 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.28□□□□□ -1.4
CLRN1P58418 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CLRN1P58418 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CLRN1P58418 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.28□□□□□ -1.4
CLRN1P58418 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.27□□□□□ -1.4
CLRN1P58418 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.27□□□□□ -1.4
CLRN1P58418 NEK2P2-201ENST00000438441 1338 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLRN1P58418 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.27□□□□□ -1.41
CLRN1P58418 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CLRN1P58418 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLRN1P58418 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.27□□□□□ -1.41
CLRN1P58418 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CLRN1P58418 AL359195.2-201ENST00000623657 4412 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CLRN1P58418 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC6.27□□□□□ -1.41
CLRN1P58418 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLRN1P58418 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CLRN1P58418 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLRN1P58418 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CLRN1P58418 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CLRN1P58418 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CLRN1P58418 AC023886.2-201ENST00000321285 411 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLRN1P58418 RNU4-81P-201ENST00000363561 144 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 U3.14-201ENST00000365363 227 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.27□□□□□ -1.41
CLRN1P58418 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.27□□□□□ -1.41
CLRN1P58418 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.27□□□□□ -1.41
CLRN1P58418 RPS3AP5-201ENST00000389400 821 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CLRN1P58418 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.27□□□□□ -1.41
CLRN1P58418 MYB-206ENST00000420123 1051 ntTSL 5 BASIC6.27□□□□□ -1.41
CLRN1P58418 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.27□□□□□ -1.41
CLRN1P58418 FO393414.1-201ENST00000428697 1184 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 RPL34P27-201ENST00000428810 349 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.27□□□□□ -1.41
CLRN1P58418 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.27□□□□□ -1.41
CLRN1P58418 HMGN1P6-201ENST00000438508 291 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CLRN1P58418 RPL21P33-201ENST00000444831 484 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 GAPDHP16-201ENST00000448152 962 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 AL031313.1-201ENST00000448435 256 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 AC019080.2-201ENST00000453859 394 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC6.27□□□□□ -1.41
CLRN1P58418 NDUFB4P1-201ENST00000462398 381 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 AC104629.2-201ENST00000468627 598 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.27□□□□□ -1.41
CLRN1P58418 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.27□□□□□ -1.41
CLRN1P58418 RPL23AP8-201ENST00000479812 475 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 AL591122.1-201ENST00000487348 492 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 MRPL49P1-201ENST00000505951 535 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 AP003084.1-201ENST00000524828 742 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 MTATP6P15-201ENST00000527233 835 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CLRN1P58418 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.27□□□□□ -1.41
CLRN1P58418 AL132640.2-202ENST00000559732 614 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CLRN1P58418 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.27□□□□□ -1.41
CLRN1P58418 AL160237.3-201ENST00000604114 1013 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 FAM72A-208ENST00000607379 1139 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 AP002791.1-201ENST00000623291 381 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 AC090617.9-201ENST00000623751 147 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.27□□□□□ -1.41
CLRN1P58418 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.27□□□□□ -1.41
CLRN1P58418 AC017104.5-201ENST00000637647 639 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
CLRN1P58418 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLRN1P58418 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CLRN1P58418 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CLRN1P58418 AC020978.6-201ENST00000571197 3177 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLRN1P58418 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLRN1P58418 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.27□□□□□ -1.41
CLRN1P58418 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLRN1P58418 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLRN1P58418 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CLRN1P58418 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
CLRN1P58418 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CLRN1P58418 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CLRN1P58418 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLRN1P58418 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.27□□□□□ -1.41
CLRN1P58418 AC104837.1-201ENST00000444644 1587 ntBASIC6.27□□□□□ -1.41
CLRN1P58418 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLRN1P58418 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC6.26□□□□□ -1.41
CLRN1P58418 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CLRN1P58418 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CLRN1P58418 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CLRN1P58418 AC125232.1-201ENST00000452554 1408 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.26□□□□□ -1.41
CLRN1P58418 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CLRN1P58418 MELK-207ENST00000536860 2342 ntTSL 2 BASIC6.26□□□□□ -1.41
CLRN1P58418 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms