Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.52□□□□□ -1.53
CDX1P47902 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CDX1P47902 AC090774.4-201ENST00000578888 1372 ntBASIC5.52□□□□□ -1.53
CDX1P47902 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CDX1P47902 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDX1P47902 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.51□□□□□ -1.53
CDX1P47902 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC5.51□□□□□ -1.53
CDX1P47902 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC5.51□□□□□ -1.53
CDX1P47902 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC5.51□□□□□ -1.53
CDX1P47902 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.51□□□□□ -1.53
CDX1P47902 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CDX1P47902 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC5.51□□□□□ -1.53
CDX1P47902 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CDX1P47902 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 EEF1GP6-201ENST00000402309 905 ntBASIC5.51□□□□□ -1.53
CDX1P47902 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 OR52N3P-201ENST00000413417 934 ntBASIC5.51□□□□□ -1.53
CDX1P47902 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.51□□□□□ -1.53
CDX1P47902 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.51□□□□□ -1.53
CDX1P47902 PSMC1P2-201ENST00000423961 1204 ntBASIC5.51□□□□□ -1.53
CDX1P47902 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC5.51□□□□□ -1.53
CDX1P47902 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.51□□□□□ -1.53
CDX1P47902 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC5.51□□□□□ -1.53
CDX1P47902 RAB9AP5-201ENST00000437794 597 ntBASIC5.51□□□□□ -1.53
CDX1P47902 RAB9AP2-201ENST00000443911 597 ntBASIC5.51□□□□□ -1.53
CDX1P47902 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.51□□□□□ -1.53
CDX1P47902 OR7E7P-201ENST00000455678 1012 ntBASIC5.51□□□□□ -1.53
CDX1P47902 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC5.51□□□□□ -1.53
CDX1P47902 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC5.51□□□□□ -1.53
CDX1P47902 SCARNA6-201ENST00000515982 265 ntBASIC5.51□□□□□ -1.53
CDX1P47902 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.51□□□□□ -1.53
CDX1P47902 AC087752.2-201ENST00000521219 281 ntBASIC5.51□□□□□ -1.53
CDX1P47902 PHBP2-201ENST00000532859 806 ntBASIC5.51□□□□□ -1.53
CDX1P47902 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.51□□□□□ -1.53
CDX1P47902 MIR744-201ENST00000578242 98 ntBASIC5.51□□□□□ -1.53
CDX1P47902 WDR45BP1-201ENST00000583470 1029 ntBASIC5.51□□□□□ -1.53
CDX1P47902 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.51□□□□□ -1.53
CDX1P47902 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC5.51□□□□□ -1.53
CDX1P47902 AC137695.2-201ENST00000603123 754 ntBASIC5.51□□□□□ -1.53
CDX1P47902 QTRT1P1-201ENST00000604344 1078 ntBASIC5.51□□□□□ -1.53
CDX1P47902 AL591222.2-201ENST00000604443 754 ntBASIC5.51□□□□□ -1.53
CDX1P47902 AC025171.4-201ENST00000607250 1047 ntBASIC5.51□□□□□ -1.53
CDX1P47902 MIR6070-201ENST00000613967 103 ntBASIC5.51□□□□□ -1.53
CDX1P47902 AL445647.2-201ENST00000615170 130 ntBASIC5.51□□□□□ -1.53
CDX1P47902 AL161420.1-201ENST00000619393 264 ntBASIC5.51□□□□□ -1.53
CDX1P47902 AF117829.2-201ENST00000619538 361 ntBASIC5.51□□□□□ -1.53
CDX1P47902 AC091059.2-201ENST00000623355 614 ntBASIC5.51□□□□□ -1.53
CDX1P47902 AC005753.1-201ENST00000623837 618 ntBASIC5.51□□□□□ -1.53
CDX1P47902 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.51□□□□□ -1.53
CDX1P47902 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CDX1P47902 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CDX1P47902 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CDX1P47902 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CDX1P47902 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CDX1P47902 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.51□□□□□ -1.53
CDX1P47902 AL161912.4-201ENST00000623889 2468 ntBASIC5.51□□□□□ -1.53
CDX1P47902 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.51□□□□□ -1.53
CDX1P47902 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CDX1P47902 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDX1P47902 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.5□□□□□ -1.53
CDX1P47902 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDX1P47902 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDX1P47902 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDX1P47902 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CDX1P47902 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDX1P47902 AC140134.1-201ENST00000511830 3544 ntBASIC5.5□□□□□ -1.53
CDX1P47902 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDX1P47902 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC5.5□□□□□ -1.53
CDX1P47902 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDX1P47902 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDX1P47902 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.5□□□□□ -1.53
CDX1P47902 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDX1P47902 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDX1P47902 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
CDX1P47902 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.5□□□□□ -1.53
CDX1P47902 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDX1P47902 PDCL3P5-201ENST00000398028 722 ntBASIC5.5□□□□□ -1.53
CDX1P47902 NPM1P37-201ENST00000403105 874 ntBASIC5.5□□□□□ -1.53
CDX1P47902 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CDX1P47902 RN7SKP254-201ENST00000410685 310 ntBASIC5.5□□□□□ -1.53
CDX1P47902 CDY17P-201ENST00000414121 1282 ntBASIC5.5□□□□□ -1.53
CDX1P47902 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms