Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.72□□□□□ -1.33
HTTP42858 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.72□□□□□ -1.33
HTTP42858 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.72□□□□□ -1.33
HTTP42858 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.72□□□□□ -1.33
HTTP42858 NYAP2-201ENST00000272907 4590 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HTTP42858 ICOSLG-204ENST00000407780 7080 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
HTTP42858 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HTTP42858 SLC25A16-207ENST00000609923 6529 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HTTP42858 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
HTTP42858 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HTTP42858 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HTTP42858 SPTB-208ENST00000556626 10153 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HTTP42858 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.72□□□□□ -1.33
HTTP42858 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.72□□□□□ -1.33
HTTP42858 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.72□□□□□ -1.33
HTTP42858 AC016027.4-201ENST00000450866 277 ntBASIC6.72□□□□□ -1.33
HTTP42858 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.72□□□□□ -1.33
HTTP42858 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.72□□□□□ -1.33
HTTP42858 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.72□□□□□ -1.33
HTTP42858 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HTTP42858 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.72□□□□□ -1.33
HTTP42858 SMG1P5-202ENST00000529428 4219 ntBASIC6.72□□□□□ -1.33
HTTP42858 SMG1P2-201ENST00000566127 4221 ntBASIC6.72□□□□□ -1.33
HTTP42858 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.71□□□□□ -1.33
HTTP42858 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
HTTP42858 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
HTTP42858 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
HTTP42858 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
HTTP42858 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC6.71□□□□□ -1.33
HTTP42858 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
HTTP42858 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
HTTP42858 RNA5SP131-201ENST00000365452 119 ntBASIC6.71□□□□□ -1.34
HTTP42858 SNRPEP6-201ENST00000407465 277 ntBASIC6.71□□□□□ -1.34
HTTP42858 AL023284.3-201ENST00000407767 334 ntBASIC6.71□□□□□ -1.34
HTTP42858 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HTTP42858 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.71□□□□□ -1.34
HTTP42858 PPATP2-201ENST00000605635 508 ntBASIC6.71□□□□□ -1.34
HTTP42858 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.71□□□□□ -1.34
HTTP42858 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.34
HTTP42858 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.71□□□□□ -1.34
HTTP42858 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.71□□□□□ -1.34
HTTP42858 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HTTP42858 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
HTTP42858 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HTTP42858 MGC15885-201ENST00000558940 2425 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HTTP42858 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
HTTP42858 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.71□□□□□ -1.34
HTTP42858 ITIH6-201ENST00000218436 4968 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HTTP42858 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
HTTP42858 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
HTTP42858 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HTTP42858 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HTTP42858 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC6.71□□□□□ -1.34
HTTP42858 CASC19-248ENST00000641674 1356 ntBASIC6.71□□□□□ -1.34
HTTP42858 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
HTTP42858 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HTTP42858 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.71□□□□□ -1.34
HTTP42858 AL360081.1-201ENST00000428299 555 ntBASIC6.71□□□□□ -1.34
HTTP42858 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.71□□□□□ -1.34
HTTP42858 RNU6-615P-201ENST00000516065 106 ntBASIC6.71□□□□□ -1.34
HTTP42858 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.71□□□□□ -1.34
HTTP42858 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.71□□□□□ -1.34
HTTP42858 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.71□□□□□ -1.34
HTTP42858 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.71□□□□□ -1.34
HTTP42858 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC6.71□□□□□ -1.34
HTTP42858 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HTTP42858 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HTTP42858 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
HTTP42858 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
HTTP42858 NLRC5-201ENST00000262510 6822 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
HTTP42858 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HTTP42858 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
HTTP42858 AC089998.1-201ENST00000548575 3141 ntBASIC6.7□□□□□ -1.34
HTTP42858 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
HTTP42858 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HTTP42858 AC092967.1-201ENST00000449016 481 ntBASIC6.7□□□□□ -1.34
HTTP42858 AL356981.1-201ENST00000454879 684 ntBASIC6.7□□□□□ -1.34
HTTP42858 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.7□□□□□ -1.34
HTTP42858 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.7□□□□□ -1.34
HTTP42858 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.7□□□□□ -1.34
HTTP42858 AC012653.2-201ENST00000621880 420 ntBASIC6.7□□□□□ -1.34
HTTP42858 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HTTP42858 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HTTP42858 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HTTP42858 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.7□□□□□ -1.34
HTTP42858 SH3GLB1-201ENST00000370558 6371 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HTTP42858 JADE1-214ENST00000611140 5648 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
HTTP42858 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC6.7□□□□□ -1.34
HTTP42858 GAPDHP24-201ENST00000328713 983 ntBASIC6.7□□□□□ -1.34
HTTP42858 AC016397.1-201ENST00000412463 242 ntBASIC6.7□□□□□ -1.34
HTTP42858 NMD3P2-201ENST00000421815 761 ntBASIC6.7□□□□□ -1.34
HTTP42858 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.7□□□□□ -1.34
HTTP42858 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.7□□□□□ -1.34
HTTP42858 RPS29P33-201ENST00000456717 146 ntBASIC6.7□□□□□ -1.34
HTTP42858 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HTTP42858 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.7□□□□□ -1.34
HTTP42858 AL049840.6-201ENST00000604583 345 ntBASIC6.7□□□□□ -1.34
HTTP42858 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HTTP42858 AC080128.2-201ENST00000641520 11863 ntBASIC6.7□□□□□ -1.34
HTTP42858 PHF3-201ENST00000262043 8233 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms