Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 NPM1P28-201ENST00000492269 840 ntBASIC7.69□□□□□ -1.18
HLA-DOAP06340 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.69□□□□□ -1.18
HLA-DOAP06340 AC006512.2-201ENST00000543250 486 ntBASIC7.69□□□□□ -1.18
HLA-DOAP06340 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.69□□□□□ -1.18
HLA-DOAP06340 AC090888.3-201ENST00000558917 509 ntBASIC7.69□□□□□ -1.18
HLA-DOAP06340 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.69□□□□□ -1.18
HLA-DOAP06340 AC002310.3-201ENST00000569728 723 ntBASIC7.69□□□□□ -1.18
HLA-DOAP06340 AL157899.1-201ENST00000604110 936 ntBASIC7.69□□□□□ -1.18
HLA-DOAP06340 AL355816.2-201ENST00000610049 647 ntBASIC7.69□□□□□ -1.18
HLA-DOAP06340 AC005393.1-201ENST00000617916 584 ntBASIC7.69□□□□□ -1.18
HLA-DOAP06340 SNORA11.6-201ENST00000619030 128 ntBASIC7.69□□□□□ -1.18
HLA-DOAP06340 AL512356.3-201ENST00000623005 461 ntBASIC7.69□□□□□ -1.18
HLA-DOAP06340 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
HLA-DOAP06340 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-DOAP06340 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-DOAP06340 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC7.69□□□□□ -1.18
HLA-DOAP06340 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
HLA-DOAP06340 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-DOAP06340 VN2R1P-201ENST00000449668 1743 ntBASIC7.69□□□□□ -1.18
HLA-DOAP06340 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.69□□□□□ -1.18
HLA-DOAP06340 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.69□□□□□ -1.18
HLA-DOAP06340 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-DOAP06340 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-DOAP06340 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC7.69□□□□□ -1.18
HLA-DOAP06340 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-DOAP06340 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-DOAP06340 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-DOAP06340 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 MTND2P12-201ENST00000417560 1252 ntBASIC7.68□□□□□ -1.18
HLA-DOAP06340 RPL7AP14-201ENST00000424041 802 ntBASIC7.68□□□□□ -1.18
HLA-DOAP06340 PSMD10P2-201ENST00000432890 672 ntBASIC7.68□□□□□ -1.18
HLA-DOAP06340 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 AC022415.1-202ENST00000486612 523 ntBASIC7.68□□□□□ -1.18
HLA-DOAP06340 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 RPL5P11-201ENST00000498068 893 ntBASIC7.68□□□□□ -1.18
HLA-DOAP06340 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-DOAP06340 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 AC002519.2-203ENST00000567043 837 ntBASIC7.68□□□□□ -1.18
HLA-DOAP06340 AC004232.2-201ENST00000574245 821 ntBASIC7.68□□□□□ -1.18
HLA-DOAP06340 AL133406.3-201ENST00000606817 541 ntBASIC7.68□□□□□ -1.18
HLA-DOAP06340 SNORA74.4-201ENST00000607595 199 ntBASIC7.68□□□□□ -1.18
HLA-DOAP06340 AP001264.1-201ENST00000620602 703 ntBASIC7.68□□□□□ -1.18
HLA-DOAP06340 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 SAMMSON-214ENST00000641395 1264 ntBASIC7.68□□□□□ -1.18
HLA-DOAP06340 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-DOAP06340 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-DOAP06340 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 AKAP17BP-201ENST00000431706 2719 ntBASIC7.68□□□□□ -1.18
HLA-DOAP06340 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-DOAP06340 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-DOAP06340 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-DOAP06340 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
HLA-DOAP06340 AC009166.2-201ENST00000624410 2833 ntBASIC7.68□□□□□ -1.18
HLA-DOAP06340 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-DOAP06340 LCOR-201ENST00000286067 4542 ntBASIC7.68□□□□□ -1.18
HLA-DOAP06340 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7.67□□□□□ -1.18
HLA-DOAP06340 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-DOAP06340 AL359694.2-201ENST00000567753 1615 ntBASIC7.67□□□□□ -1.18
HLA-DOAP06340 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-DOAP06340 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-DOAP06340 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-DOAP06340 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-DOAP06340 AC009237.3-203ENST00000442128 3551 ntBASIC7.67□□□□□ -1.18
HLA-DOAP06340 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.67□□□□□ -1.18
HLA-DOAP06340 AC098614.1-202ENST00000634895 1830 ntBASIC7.67□□□□□ -1.18
HLA-DOAP06340 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
HLA-DOAP06340 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
HLA-DOAP06340 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-DOAP06340 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
HLA-DOAP06340 SNORA40.4-201ENST00000390971 128 ntBASIC7.67□□□□□ -1.18
HLA-DOAP06340 RN7SKP281-201ENST00000410472 352 ntBASIC7.67□□□□□ -1.18
HLA-DOAP06340 DHFRP2-201ENST00000414224 547 ntBASIC7.67□□□□□ -1.18
HLA-DOAP06340 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.67□□□□□ -1.18
HLA-DOAP06340 AC008753.1-201ENST00000423096 284 ntBASIC7.67□□□□□ -1.18
HLA-DOAP06340 AC092865.3-201ENST00000425390 1026 ntBASIC7.67□□□□□ -1.18
HLA-DOAP06340 MED28P4-201ENST00000433137 572 ntBASIC7.67□□□□□ -1.18
HLA-DOAP06340 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC7.67□□□□□ -1.18
HLA-DOAP06340 CXCR2P1-202ENST00000443392 1074 ntBASIC7.67□□□□□ -1.18
HLA-DOAP06340 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.67□□□□□ -1.18
HLA-DOAP06340 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.67□□□□□ -1.18
HLA-DOAP06340 RPL23AP64-201ENST00000469465 435 ntBASIC7.67□□□□□ -1.18
HLA-DOAP06340 AP002884.1-201ENST00000479691 655 ntBASIC7.67□□□□□ -1.18
HLA-DOAP06340 AC063943.2-201ENST00000495697 534 ntBASIC7.67□□□□□ -1.18
HLA-DOAP06340 AC022206.1-201ENST00000495947 347 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms