Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
APOEP02649 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
APOEP02649 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
APOEP02649 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.85□□□□□ -1.31
APOEP02649 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
APOEP02649 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
APOEP02649 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
APOEP02649 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
APOEP02649 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.85□□□□□ -1.31
APOEP02649 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.85□□□□□ -1.31
APOEP02649 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
APOEP02649 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.85□□□□□ -1.31
APOEP02649 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.85□□□□□ -1.31
APOEP02649 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
APOEP02649 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.85□□□□□ -1.31
APOEP02649 AL359092.1-201ENST00000417156 265 ntBASIC6.85□□□□□ -1.31
APOEP02649 Z82198.3-201ENST00000421145 199 ntBASIC6.85□□□□□ -1.31
APOEP02649 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.85□□□□□ -1.31
APOEP02649 CCNJP1-201ENST00000450600 1149 ntBASIC6.85□□□□□ -1.31
APOEP02649 AL139156.3-201ENST00000454802 394 ntBASIC6.85□□□□□ -1.31
APOEP02649 AC002075.1-201ENST00000457396 676 ntBASIC6.85□□□□□ -1.31
APOEP02649 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.85□□□□□ -1.31
APOEP02649 AC093870.1-201ENST00000506837 213 ntBASIC6.85□□□□□ -1.31
APOEP02649 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
APOEP02649 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.85□□□□□ -1.31
APOEP02649 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.85□□□□□ -1.31
APOEP02649 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.85□□□□□ -1.31
APOEP02649 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.85□□□□□ -1.31
APOEP02649 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.85□□□□□ -1.31
APOEP02649 AC092718.4-201ENST00000566639 716 ntBASIC6.85□□□□□ -1.31
APOEP02649 MIR4301-201ENST00000577203 66 ntBASIC6.85□□□□□ -1.31
APOEP02649 AC114477.1-201ENST00000605097 605 ntBASIC6.85□□□□□ -1.31
APOEP02649 AL008582.1-201ENST00000609612 442 ntBASIC6.85□□□□□ -1.31
APOEP02649 HTR1DP1-201ENST00000616500 888 ntBASIC6.85□□□□□ -1.31
APOEP02649 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.85□□□□□ -1.31
APOEP02649 MIR6813-201ENST00000621638 56 ntBASIC6.85□□□□□ -1.31
APOEP02649 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.85□□□□□ -1.31
APOEP02649 AP002370.1-201ENST00000528055 1602 ntBASIC6.85□□□□□ -1.31
APOEP02649 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
APOEP02649 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.85□□□□□ -1.31
APOEP02649 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
APOEP02649 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.85□□□□□ -1.31
APOEP02649 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.85□□□□□ -1.31
APOEP02649 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.84□□□□□ -1.31
APOEP02649 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.84□□□□□ -1.31
APOEP02649 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.84□□□□□ -1.31
APOEP02649 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
APOEP02649 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
APOEP02649 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
APOEP02649 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.84□□□□□ -1.31
APOEP02649 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
APOEP02649 TTC41P-205ENST00000551270 3963 ntBASIC6.84□□□□□ -1.31
APOEP02649 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.84□□□□□ -1.31
APOEP02649 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
APOEP02649 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
APOEP02649 OR7A2P-201ENST00000304105 930 ntBASIC6.84□□□□□ -1.31
APOEP02649 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.84□□□□□ -1.31
APOEP02649 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.84□□□□□ -1.31
APOEP02649 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.84□□□□□ -1.31
APOEP02649 COL11A2P1-205ENST00000441798 676 ntBASIC6.84□□□□□ -1.31
APOEP02649 RN7SL413P-201ENST00000482700 297 ntBASIC6.84□□□□□ -1.31
APOEP02649 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.84□□□□□ -1.31
APOEP02649 SNORA58-201ENST00000505219 137 ntBASIC6.84□□□□□ -1.31
APOEP02649 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
APOEP02649 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.84□□□□□ -1.31
APOEP02649 AC037479.1-201ENST00000558361 625 ntBASIC6.84□□□□□ -1.31
APOEP02649 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.84□□□□□ -1.31
APOEP02649 RN7SL208P-201ENST00000577964 296 ntBASIC6.84□□□□□ -1.31
APOEP02649 AL953862.2-201ENST00000603089 820 ntBASIC6.84□□□□□ -1.31
APOEP02649 AC025171.4-201ENST00000607250 1047 ntBASIC6.84□□□□□ -1.31
APOEP02649 U1.41-201ENST00000617626 165 ntBASIC6.84□□□□□ -1.31
APOEP02649 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
APOEP02649 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.84□□□□□ -1.31
APOEP02649 PARP4P1-201ENST00000435945 2337 ntBASIC6.84□□□□□ -1.31
APOEP02649 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.84□□□□□ -1.31
APOEP02649 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
APOEP02649 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.84□□□□□ -1.32
APOEP02649 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
APOEP02649 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
APOEP02649 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
APOEP02649 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
APOEP02649 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
APOEP02649 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
APOEP02649 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
APOEP02649 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
APOEP02649 MAPK10-287ENST00000641217 3037 ntBASIC6.83□□□□□ -1.32
APOEP02649 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.83□□□□□ -1.32
APOEP02649 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
APOEP02649 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.83□□□□□ -1.32
APOEP02649 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
APOEP02649 AC023245.2-201ENST00000530760 2978 ntBASIC6.83□□□□□ -1.32
APOEP02649 AC087392.3-202ENST00000358446 1754 ntBASIC6.83□□□□□ -1.32
APOEP02649 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.83□□□□□ -1.32
APOEP02649 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
APOEP02649 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.83□□□□□ -1.32
APOEP02649 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
APOEP02649 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
APOEP02649 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.83□□□□□ -1.32
APOEP02649 MRPS6P2-201ENST00000381143 370 ntBASIC6.83□□□□□ -1.32
APOEP02649 RNU1-46P-201ENST00000384425 164 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms